Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Slc46a2Q8CA03 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Slc46a2Q8CA03 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Slc46a2Q8CA03 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Slc46a2Q8CA03 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.92■□□□□ 0.94
Slc46a2Q8CA03 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Slc46a2Q8CA03 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Slc46a2Q8CA03 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Slc46a2Q8CA03 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Slc46a2Q8CA03 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Slc46a2Q8CA03 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Slc46a2Q8CA03 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Slc46a2Q8CA03 Gm9812-201ENSMUST00000061934 968 ntBASIC20.91■□□□□ 0.94
Slc46a2Q8CA03 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.9■□□□□ 0.94
Slc46a2Q8CA03 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Slc46a2Q8CA03 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.9■□□□□ 0.94
Slc46a2Q8CA03 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Slc46a2Q8CA03 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Slc46a2Q8CA03 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Slc46a2Q8CA03 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
Slc46a2Q8CA03 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Slc46a2Q8CA03 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Slc46a2Q8CA03 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Slc46a2Q8CA03 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Slc46a2Q8CA03 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Slc46a2Q8CA03 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Slc46a2Q8CA03 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Slc46a2Q8CA03 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Slc46a2Q8CA03 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
Slc46a2Q8CA03 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Slc46a2Q8CA03 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Slc46a2Q8CA03 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Slc46a2Q8CA03 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.88■□□□□ 0.93
Slc46a2Q8CA03 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.88■□□□□ 0.93
Slc46a2Q8CA03 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Slc46a2Q8CA03 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Slc46a2Q8CA03 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Slc46a2Q8CA03 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Slc46a2Q8CA03 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.87■□□□□ 0.93
Slc46a2Q8CA03 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
Slc46a2Q8CA03 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slc46a2Q8CA03 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.86■□□□□ 0.93
Slc46a2Q8CA03 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slc46a2Q8CA03 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slc46a2Q8CA03 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slc46a2Q8CA03 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slc46a2Q8CA03 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slc46a2Q8CA03 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
Slc46a2Q8CA03 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.85■□□□□ 0.93
Slc46a2Q8CA03 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Slc46a2Q8CA03 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.85■□□□□ 0.93
Slc46a2Q8CA03 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Slc46a2Q8CA03 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
Slc46a2Q8CA03 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Slc46a2Q8CA03 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slc46a2Q8CA03 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slc46a2Q8CA03 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Slc46a2Q8CA03 Gm4799-201ENSMUST00000095396 657 ntBASIC20.84■□□□□ 0.93
Slc46a2Q8CA03 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slc46a2Q8CA03 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Slc46a2Q8CA03 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.83■□□□□ 0.93
Slc46a2Q8CA03 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Slc46a2Q8CA03 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Slc46a2Q8CA03 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slc46a2Q8CA03 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slc46a2Q8CA03 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Slc46a2Q8CA03 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slc46a2Q8CA03 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.82■□□□□ 0.92
Slc46a2Q8CA03 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slc46a2Q8CA03 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slc46a2Q8CA03 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slc46a2Q8CA03 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slc46a2Q8CA03 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slc46a2Q8CA03 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Slc46a2Q8CA03 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Slc46a2Q8CA03 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Slc46a2Q8CA03 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.8■□□□□ 0.92
Slc46a2Q8CA03 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Slc46a2Q8CA03 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Slc46a2Q8CA03 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.8■□□□□ 0.92
Slc46a2Q8CA03 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.8■□□□□ 0.92
Slc46a2Q8CA03 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Slc46a2Q8CA03 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.79■□□□□ 0.92
Slc46a2Q8CA03 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.79■□□□□ 0.92
Slc46a2Q8CA03 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Slc46a2Q8CA03 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Slc46a2Q8CA03 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Slc46a2Q8CA03 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Slc46a2Q8CA03 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Slc46a2Q8CA03 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Slc46a2Q8CA03 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Slc46a2Q8CA03 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Slc46a2Q8CA03 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Slc46a2Q8CA03 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.77■□□□□ 0.92
Slc46a2Q8CA03 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.77■□□□□ 0.92
Slc46a2Q8CA03 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Slc46a2Q8CA03 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Slc46a2Q8CA03 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.77■□□□□ 0.91
Slc46a2Q8CA03 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Slc46a2Q8CA03 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms