Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Cfap54Q8C6S9 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
Cfap54Q8C6S9 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cfap54Q8C6S9 AC140930.3-201ENSMUST00000222935 274 ntBASIC21.35■■□□□ 1.01
Cfap54Q8C6S9 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.35■■□□□ 1.01
Cfap54Q8C6S9 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cfap54Q8C6S9 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cfap54Q8C6S9 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Cfap54Q8C6S9 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cfap54Q8C6S9 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cfap54Q8C6S9 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cfap54Q8C6S9 Golgb1-201ENSMUST00000023534 498 ntBASIC21.33■■□□□ 1.01
Cfap54Q8C6S9 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cfap54Q8C6S9 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.33■■□□□ 1.01
Cfap54Q8C6S9 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Cfap54Q8C6S9 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Cfap54Q8C6S9 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.33■■□□□ 1
Cfap54Q8C6S9 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Cfap54Q8C6S9 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.32■■□□□ 1
Cfap54Q8C6S9 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.32■■□□□ 1
Cfap54Q8C6S9 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cfap54Q8C6S9 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.32■■□□□ 1
Cfap54Q8C6S9 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.31■■□□□ 1
Cfap54Q8C6S9 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cfap54Q8C6S9 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Cfap54Q8C6S9 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cfap54Q8C6S9 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.3■■□□□ 1
Cfap54Q8C6S9 Gm12821-201ENSMUST00000120022 600 ntBASIC21.3■■□□□ 1
Cfap54Q8C6S9 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.3■■□□□ 1
Cfap54Q8C6S9 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cfap54Q8C6S9 Gm40881-201ENSMUST00000223397 166 ntBASIC21.29■■□□□ 1
Cfap54Q8C6S9 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Cfap54Q8C6S9 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC21.29■■□□□ 1
Cfap54Q8C6S9 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Cfap54Q8C6S9 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC21.29■■□□□ 1
Cfap54Q8C6S9 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.29■■□□□ 1
Cfap54Q8C6S9 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.28■■□□□ 1
Cfap54Q8C6S9 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cfap54Q8C6S9 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cfap54Q8C6S9 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cfap54Q8C6S9 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Cfap54Q8C6S9 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.28■■□□□ 1
Cfap54Q8C6S9 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cfap54Q8C6S9 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.27■■□□□ 1
Cfap54Q8C6S9 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Cfap54Q8C6S9 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Cfap54Q8C6S9 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cfap54Q8C6S9 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Cfap54Q8C6S9 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
Cfap54Q8C6S9 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Cfap54Q8C6S9 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Cfap54Q8C6S9 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cfap54Q8C6S9 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Cfap54Q8C6S9 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Cfap54Q8C6S9 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cfap54Q8C6S9 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.25■□□□□ 0.99
Cfap54Q8C6S9 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cfap54Q8C6S9 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Cfap54Q8C6S9 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Cfap54Q8C6S9 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Cfap54Q8C6S9 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cfap54Q8C6S9 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cfap54Q8C6S9 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Cfap54Q8C6S9 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC21.24■□□□□ 0.99
Cfap54Q8C6S9 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cfap54Q8C6S9 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cfap54Q8C6S9 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Cfap54Q8C6S9 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Cfap54Q8C6S9 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Cfap54Q8C6S9 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.24■□□□□ 0.99
Cfap54Q8C6S9 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Cfap54Q8C6S9 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Cfap54Q8C6S9 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cfap54Q8C6S9 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cfap54Q8C6S9 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cfap54Q8C6S9 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cfap54Q8C6S9 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cfap54Q8C6S9 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21.22■□□□□ 0.99
Cfap54Q8C6S9 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cfap54Q8C6S9 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cfap54Q8C6S9 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.21■□□□□ 0.99
Cfap54Q8C6S9 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cfap54Q8C6S9 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.2■□□□□ 0.98
Cfap54Q8C6S9 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cfap54Q8C6S9 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Cfap54Q8C6S9 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cfap54Q8C6S9 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Cfap54Q8C6S9 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cfap54Q8C6S9 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Cfap54Q8C6S9 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.19■□□□□ 0.98
Cfap54Q8C6S9 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.19■□□□□ 0.98
Cfap54Q8C6S9 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Cfap54Q8C6S9 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC21.19■□□□□ 0.98
Cfap54Q8C6S9 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Cfap54Q8C6S9 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cfap54Q8C6S9 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cfap54Q8C6S9 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.18■□□□□ 0.98
Cfap54Q8C6S9 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cfap54Q8C6S9 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cfap54Q8C6S9 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms