Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
Usp44Q8C2S0 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.72
Usp44Q8C2S0 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC25.76■■□□□ 1.71
Usp44Q8C2S0 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Usp44Q8C2S0 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
Usp44Q8C2S0 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC25.75■■□□□ 1.71
Usp44Q8C2S0 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Usp44Q8C2S0 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC25.74■■□□□ 1.71
Usp44Q8C2S0 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC25.74■■□□□ 1.71
Usp44Q8C2S0 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
Usp44Q8C2S0 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC25.74■■□□□ 1.71
Usp44Q8C2S0 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Usp44Q8C2S0 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
Usp44Q8C2S0 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Usp44Q8C2S0 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Usp44Q8C2S0 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
Usp44Q8C2S0 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC25.73■■□□□ 1.71
Usp44Q8C2S0 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Usp44Q8C2S0 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Usp44Q8C2S0 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Usp44Q8C2S0 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC25.71■■□□□ 1.71
Usp44Q8C2S0 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Usp44Q8C2S0 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC25.71■■□□□ 1.71
Usp44Q8C2S0 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
Usp44Q8C2S0 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
Usp44Q8C2S0 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Usp44Q8C2S0 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Usp44Q8C2S0 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC25.7■■□□□ 1.7
Usp44Q8C2S0 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
Usp44Q8C2S0 AC115037.1-201ENSMUST00000223391 2173 ntBASIC25.69■■□□□ 1.7
Usp44Q8C2S0 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
Usp44Q8C2S0 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Usp44Q8C2S0 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Usp44Q8C2S0 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC25.69■■□□□ 1.7
Usp44Q8C2S0 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC25.69■■□□□ 1.7
Usp44Q8C2S0 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Usp44Q8C2S0 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
Usp44Q8C2S0 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
Usp44Q8C2S0 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Usp44Q8C2S0 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Usp44Q8C2S0 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Usp44Q8C2S0 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Usp44Q8C2S0 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC25.68■■□□□ 1.7
Usp44Q8C2S0 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Usp44Q8C2S0 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Usp44Q8C2S0 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Usp44Q8C2S0 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Usp44Q8C2S0 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Usp44Q8C2S0 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC25.68■■□□□ 1.7
Usp44Q8C2S0 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Usp44Q8C2S0 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Usp44Q8C2S0 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
Usp44Q8C2S0 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC25.67■■□□□ 1.7
Usp44Q8C2S0 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Usp44Q8C2S0 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Usp44Q8C2S0 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
Usp44Q8C2S0 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC25.66■■□□□ 1.7
Usp44Q8C2S0 Gm5067-201ENSMUST00000170449 1009 ntBASIC25.66■■□□□ 1.7
Usp44Q8C2S0 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Usp44Q8C2S0 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
Usp44Q8C2S0 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Usp44Q8C2S0 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Usp44Q8C2S0 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Usp44Q8C2S0 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
Usp44Q8C2S0 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Usp44Q8C2S0 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Usp44Q8C2S0 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Usp44Q8C2S0 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Usp44Q8C2S0 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
Usp44Q8C2S0 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.7
Usp44Q8C2S0 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC25.64■■□□□ 1.7
Usp44Q8C2S0 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
Usp44Q8C2S0 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Usp44Q8C2S0 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Usp44Q8C2S0 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC25.64■■□□□ 1.69
Usp44Q8C2S0 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Usp44Q8C2S0 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Usp44Q8C2S0 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Usp44Q8C2S0 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
Usp44Q8C2S0 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
Usp44Q8C2S0 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Usp44Q8C2S0 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Usp44Q8C2S0 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
Usp44Q8C2S0 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC25.61■■□□□ 1.69
Usp44Q8C2S0 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
Usp44Q8C2S0 Nsd1-206ENSMUST00000224918 1001 ntBASIC25.61■■□□□ 1.69
Usp44Q8C2S0 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC25.61■■□□□ 1.69
Usp44Q8C2S0 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Usp44Q8C2S0 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC25.6■■□□□ 1.69
Usp44Q8C2S0 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
Usp44Q8C2S0 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Usp44Q8C2S0 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Usp44Q8C2S0 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC25.59■■□□□ 1.69
Usp44Q8C2S0 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Usp44Q8C2S0 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
Usp44Q8C2S0 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
Usp44Q8C2S0 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC25.59■■□□□ 1.69
Usp44Q8C2S0 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Usp44Q8C2S0 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
Usp44Q8C2S0 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms