Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vps9d1Q8C190 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Vps9d1Q8C190 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Vps9d1Q8C190 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vps9d1Q8C190 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Vps9d1Q8C190 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Vps9d1Q8C190 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.24■□□□□ 0.83
Vps9d1Q8C190 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Vps9d1Q8C190 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vps9d1Q8C190 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.24■□□□□ 0.83
Vps9d1Q8C190 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Vps9d1Q8C190 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vps9d1Q8C190 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Vps9d1Q8C190 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vps9d1Q8C190 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vps9d1Q8C190 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Vps9d1Q8C190 Mir3960-201ENSMUST00000198213 73 ntBASIC20.23■□□□□ 0.83
Vps9d1Q8C190 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.23■□□□□ 0.83
Vps9d1Q8C190 Gm9812-201ENSMUST00000061934 968 ntBASIC20.23■□□□□ 0.83
Vps9d1Q8C190 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vps9d1Q8C190 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vps9d1Q8C190 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.23■□□□□ 0.83
Vps9d1Q8C190 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.22■□□□□ 0.83
Vps9d1Q8C190 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.22■□□□□ 0.83
Vps9d1Q8C190 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vps9d1Q8C190 Gm11175-201ENSMUST00000116172 543 ntBASIC20.22■□□□□ 0.83
Vps9d1Q8C190 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vps9d1Q8C190 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Vps9d1Q8C190 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.21■□□□□ 0.83
Vps9d1Q8C190 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.21■□□□□ 0.83
Vps9d1Q8C190 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.21■□□□□ 0.83
Vps9d1Q8C190 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Vps9d1Q8C190 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vps9d1Q8C190 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Vps9d1Q8C190 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.2■□□□□ 0.82
Vps9d1Q8C190 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
Vps9d1Q8C190 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Vps9d1Q8C190 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vps9d1Q8C190 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vps9d1Q8C190 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vps9d1Q8C190 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.19■□□□□ 0.82
Vps9d1Q8C190 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Vps9d1Q8C190 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Vps9d1Q8C190 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Vps9d1Q8C190 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vps9d1Q8C190 Gm6311-201ENSMUST00000073790 878 ntBASIC20.18■□□□□ 0.82
Vps9d1Q8C190 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vps9d1Q8C190 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.18■□□□□ 0.82
Vps9d1Q8C190 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Vps9d1Q8C190 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vps9d1Q8C190 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.17■□□□□ 0.82
Vps9d1Q8C190 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vps9d1Q8C190 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Vps9d1Q8C190 Mir6538-201ENSMUST00000183713 110 ntBASIC20.17■□□□□ 0.82
Vps9d1Q8C190 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Vps9d1Q8C190 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
Vps9d1Q8C190 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Vps9d1Q8C190 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Vps9d1Q8C190 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Vps9d1Q8C190 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Vps9d1Q8C190 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Vps9d1Q8C190 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Vps9d1Q8C190 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.16■□□□□ 0.82
Vps9d1Q8C190 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Vps9d1Q8C190 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Vps9d1Q8C190 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Vps9d1Q8C190 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.15■□□□□ 0.82
Vps9d1Q8C190 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vps9d1Q8C190 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Vps9d1Q8C190 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vps9d1Q8C190 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Vps9d1Q8C190 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Vps9d1Q8C190 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Vps9d1Q8C190 Terc-201ENSMUST00000082862 423 ntBASIC20.14■□□□□ 0.81
Vps9d1Q8C190 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vps9d1Q8C190 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vps9d1Q8C190 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Vps9d1Q8C190 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vps9d1Q8C190 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vps9d1Q8C190 Gm45364-201ENSMUST00000210883 159 ntBASIC20.13■□□□□ 0.81
Vps9d1Q8C190 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vps9d1Q8C190 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Vps9d1Q8C190 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Vps9d1Q8C190 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.12■□□□□ 0.81
Vps9d1Q8C190 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.12■□□□□ 0.81
Vps9d1Q8C190 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Vps9d1Q8C190 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Vps9d1Q8C190 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vps9d1Q8C190 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Vps9d1Q8C190 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vps9d1Q8C190 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.12■□□□□ 0.81
Vps9d1Q8C190 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vps9d1Q8C190 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Vps9d1Q8C190 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.12■□□□□ 0.81
Vps9d1Q8C190 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vps9d1Q8C190 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vps9d1Q8C190 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.11■□□□□ 0.81
Vps9d1Q8C190 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vps9d1Q8C190 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vps9d1Q8C190 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms