Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.6■□□□□ 0.41
Chd9Q8BYH8 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Chd9Q8BYH8 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chd9Q8BYH8 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.6■□□□□ 0.41
Chd9Q8BYH8 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.6■□□□□ 0.41
Chd9Q8BYH8 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.6■□□□□ 0.41
Chd9Q8BYH8 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chd9Q8BYH8 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Chd9Q8BYH8 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Chd9Q8BYH8 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.59■□□□□ 0.41
Chd9Q8BYH8 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Chd9Q8BYH8 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chd9Q8BYH8 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Chd9Q8BYH8 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Chd9Q8BYH8 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC17.58■□□□□ 0.4
Chd9Q8BYH8 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Chd9Q8BYH8 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.58■□□□□ 0.4
Chd9Q8BYH8 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chd9Q8BYH8 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chd9Q8BYH8 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Chd9Q8BYH8 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC17.56■□□□□ 0.4
Chd9Q8BYH8 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.56■□□□□ 0.4
Chd9Q8BYH8 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Chd9Q8BYH8 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chd9Q8BYH8 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chd9Q8BYH8 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chd9Q8BYH8 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.56■□□□□ 0.4
Chd9Q8BYH8 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Chd9Q8BYH8 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chd9Q8BYH8 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chd9Q8BYH8 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Chd9Q8BYH8 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Chd9Q8BYH8 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chd9Q8BYH8 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chd9Q8BYH8 Gm4419-202ENSMUST00000226239 1431 ntBASIC17.55■□□□□ 0.4
Chd9Q8BYH8 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Chd9Q8BYH8 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Chd9Q8BYH8 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.54■□□□□ 0.4
Chd9Q8BYH8 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chd9Q8BYH8 Gm6139-201ENSMUST00000079261 882 ntBASIC17.54■□□□□ 0.4
Chd9Q8BYH8 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chd9Q8BYH8 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chd9Q8BYH8 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.54■□□□□ 0.4
Chd9Q8BYH8 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chd9Q8BYH8 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chd9Q8BYH8 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chd9Q8BYH8 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chd9Q8BYH8 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC17.53■□□□□ 0.4
Chd9Q8BYH8 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Chd9Q8BYH8 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Chd9Q8BYH8 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chd9Q8BYH8 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chd9Q8BYH8 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Chd9Q8BYH8 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chd9Q8BYH8 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.52■□□□□ 0.4
Chd9Q8BYH8 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chd9Q8BYH8 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Chd9Q8BYH8 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Chd9Q8BYH8 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chd9Q8BYH8 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.51■□□□□ 0.39
Chd9Q8BYH8 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Chd9Q8BYH8 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Chd9Q8BYH8 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Chd9Q8BYH8 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Chd9Q8BYH8 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.5■□□□□ 0.39
Chd9Q8BYH8 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Chd9Q8BYH8 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chd9Q8BYH8 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chd9Q8BYH8 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chd9Q8BYH8 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Chd9Q8BYH8 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chd9Q8BYH8 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC17.5■□□□□ 0.39
Chd9Q8BYH8 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chd9Q8BYH8 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chd9Q8BYH8 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC17.49■□□□□ 0.39
Chd9Q8BYH8 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.49■□□□□ 0.39
Chd9Q8BYH8 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC17.48■□□□□ 0.39
Chd9Q8BYH8 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.48■□□□□ 0.39
Chd9Q8BYH8 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Chd9Q8BYH8 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Chd9Q8BYH8 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chd9Q8BYH8 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chd9Q8BYH8 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chd9Q8BYH8 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Chd9Q8BYH8 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC17.48■□□□□ 0.39
Chd9Q8BYH8 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
Chd9Q8BYH8 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Chd9Q8BYH8 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chd9Q8BYH8 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chd9Q8BYH8 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chd9Q8BYH8 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chd9Q8BYH8 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chd9Q8BYH8 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chd9Q8BYH8 AC164433.2-201ENSMUST00000226346 1701 ntBASIC17.47■□□□□ 0.39
Chd9Q8BYH8 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
Chd9Q8BYH8 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chd9Q8BYH8 Gm16464-201ENSMUST00000117815 1095 ntBASIC17.46■□□□□ 0.39
Chd9Q8BYH8 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Chd9Q8BYH8 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chd9Q8BYH8 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms