Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Smg1Q8BKX6 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.89■□□□□ 0.61
Smg1Q8BKX6 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smg1Q8BKX6 AC153890.1-201ENSMUST00000220021 2469 ntBASIC18.89■□□□□ 0.61
Smg1Q8BKX6 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smg1Q8BKX6 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smg1Q8BKX6 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Smg1Q8BKX6 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Smg1Q8BKX6 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smg1Q8BKX6 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smg1Q8BKX6 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smg1Q8BKX6 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Smg1Q8BKX6 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smg1Q8BKX6 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.87■□□□□ 0.61
Smg1Q8BKX6 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.87■□□□□ 0.61
Smg1Q8BKX6 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.87■□□□□ 0.61
Smg1Q8BKX6 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smg1Q8BKX6 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Smg1Q8BKX6 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Smg1Q8BKX6 AC117769.4-201ENSMUST00000225679 685 ntBASIC18.85■□□□□ 0.61
Smg1Q8BKX6 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Smg1Q8BKX6 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smg1Q8BKX6 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Smg1Q8BKX6 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smg1Q8BKX6 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.84■□□□□ 0.61
Smg1Q8BKX6 Gm27011-201ENSMUST00000182352 972 ntBASIC18.84■□□□□ 0.61
Smg1Q8BKX6 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC18.84■□□□□ 0.61
Smg1Q8BKX6 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smg1Q8BKX6 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smg1Q8BKX6 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Smg1Q8BKX6 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smg1Q8BKX6 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smg1Q8BKX6 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smg1Q8BKX6 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smg1Q8BKX6 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smg1Q8BKX6 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Smg1Q8BKX6 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smg1Q8BKX6 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
Smg1Q8BKX6 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Smg1Q8BKX6 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
Smg1Q8BKX6 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Smg1Q8BKX6 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.81■□□□□ 0.6
Smg1Q8BKX6 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Smg1Q8BKX6 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smg1Q8BKX6 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smg1Q8BKX6 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smg1Q8BKX6 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smg1Q8BKX6 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smg1Q8BKX6 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smg1Q8BKX6 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smg1Q8BKX6 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smg1Q8BKX6 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Smg1Q8BKX6 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.79■□□□□ 0.6
Smg1Q8BKX6 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smg1Q8BKX6 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Smg1Q8BKX6 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smg1Q8BKX6 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smg1Q8BKX6 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Smg1Q8BKX6 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Smg1Q8BKX6 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.78■□□□□ 0.6
Smg1Q8BKX6 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Smg1Q8BKX6 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smg1Q8BKX6 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Smg1Q8BKX6 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smg1Q8BKX6 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smg1Q8BKX6 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smg1Q8BKX6 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Smg1Q8BKX6 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smg1Q8BKX6 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.77■□□□□ 0.6
Smg1Q8BKX6 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smg1Q8BKX6 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Smg1Q8BKX6 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Smg1Q8BKX6 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Smg1Q8BKX6 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smg1Q8BKX6 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.76■□□□□ 0.59
Smg1Q8BKX6 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.76■□□□□ 0.59
Smg1Q8BKX6 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.76■□□□□ 0.59
Smg1Q8BKX6 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Smg1Q8BKX6 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Smg1Q8BKX6 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Smg1Q8BKX6 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smg1Q8BKX6 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Smg1Q8BKX6 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Smg1Q8BKX6 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.75■□□□□ 0.59
Smg1Q8BKX6 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.75■□□□□ 0.59
Smg1Q8BKX6 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Smg1Q8BKX6 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smg1Q8BKX6 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smg1Q8BKX6 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smg1Q8BKX6 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smg1Q8BKX6 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smg1Q8BKX6 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.74■□□□□ 0.59
Smg1Q8BKX6 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.73■□□□□ 0.59
Smg1Q8BKX6 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smg1Q8BKX6 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.73■□□□□ 0.59
Smg1Q8BKX6 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Smg1Q8BKX6 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smg1Q8BKX6 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Smg1Q8BKX6 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smg1Q8BKX6 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms