Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Srrm4Q8BKA3 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Srrm4Q8BKA3 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.86■□□□□ 0.61
Srrm4Q8BKA3 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Srrm4Q8BKA3 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.85■□□□□ 0.61
Srrm4Q8BKA3 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Srrm4Q8BKA3 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Srrm4Q8BKA3 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC18.84■□□□□ 0.61
Srrm4Q8BKA3 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Srrm4Q8BKA3 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Srrm4Q8BKA3 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
Srrm4Q8BKA3 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Srrm4Q8BKA3 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Srrm4Q8BKA3 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Srrm4Q8BKA3 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Srrm4Q8BKA3 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Srrm4Q8BKA3 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Srrm4Q8BKA3 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Srrm4Q8BKA3 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.83■□□□□ 0.6
Srrm4Q8BKA3 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Srrm4Q8BKA3 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Srrm4Q8BKA3 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Srrm4Q8BKA3 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Srrm4Q8BKA3 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Srrm4Q8BKA3 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.81■□□□□ 0.6
Srrm4Q8BKA3 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Srrm4Q8BKA3 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Srrm4Q8BKA3 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Srrm4Q8BKA3 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Srrm4Q8BKA3 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Srrm4Q8BKA3 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Srrm4Q8BKA3 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Srrm4Q8BKA3 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Srrm4Q8BKA3 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Srrm4Q8BKA3 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Srrm4Q8BKA3 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Srrm4Q8BKA3 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Srrm4Q8BKA3 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Srrm4Q8BKA3 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Srrm4Q8BKA3 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Srrm4Q8BKA3 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Srrm4Q8BKA3 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Srrm4Q8BKA3 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Srrm4Q8BKA3 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Srrm4Q8BKA3 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Srrm4Q8BKA3 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Srrm4Q8BKA3 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Srrm4Q8BKA3 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Srrm4Q8BKA3 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Srrm4Q8BKA3 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Srrm4Q8BKA3 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Srrm4Q8BKA3 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Srrm4Q8BKA3 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Srrm4Q8BKA3 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Srrm4Q8BKA3 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Srrm4Q8BKA3 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Srrm4Q8BKA3 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.77■□□□□ 0.6
Srrm4Q8BKA3 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Srrm4Q8BKA3 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Srrm4Q8BKA3 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Srrm4Q8BKA3 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Srrm4Q8BKA3 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Srrm4Q8BKA3 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Srrm4Q8BKA3 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Srrm4Q8BKA3 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Srrm4Q8BKA3 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Srrm4Q8BKA3 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.76■□□□□ 0.59
Srrm4Q8BKA3 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18.76■□□□□ 0.59
Srrm4Q8BKA3 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Srrm4Q8BKA3 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Srrm4Q8BKA3 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Srrm4Q8BKA3 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Srrm4Q8BKA3 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.75■□□□□ 0.59
Srrm4Q8BKA3 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Srrm4Q8BKA3 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Srrm4Q8BKA3 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Srrm4Q8BKA3 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Srrm4Q8BKA3 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Srrm4Q8BKA3 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Srrm4Q8BKA3 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Srrm4Q8BKA3 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Srrm4Q8BKA3 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Srrm4Q8BKA3 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Srrm4Q8BKA3 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Srrm4Q8BKA3 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Srrm4Q8BKA3 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Srrm4Q8BKA3 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Srrm4Q8BKA3 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Srrm4Q8BKA3 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Srrm4Q8BKA3 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Srrm4Q8BKA3 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Srrm4Q8BKA3 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Srrm4Q8BKA3 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Srrm4Q8BKA3 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.72■□□□□ 0.59
Srrm4Q8BKA3 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Srrm4Q8BKA3 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC18.72■□□□□ 0.59
Srrm4Q8BKA3 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Srrm4Q8BKA3 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Srrm4Q8BKA3 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Srrm4Q8BKA3 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms