Protein–RNA interactions for Protein: Q8BJ37

Tdp1, Tyrosyl-DNA phosphodiesterase 1, mousemouse

Predictions only

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp1Q8BJ37 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Tdp1Q8BJ37 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
Tdp1Q8BJ37 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC24.38■■□□□ 1.49
Tdp1Q8BJ37 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Tdp1Q8BJ37 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
Tdp1Q8BJ37 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Tdp1Q8BJ37 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Tdp1Q8BJ37 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Tdp1Q8BJ37 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
Tdp1Q8BJ37 Gm28536-201ENSMUST00000190971 1317 ntBASIC24.36■■□□□ 1.49
Tdp1Q8BJ37 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Tdp1Q8BJ37 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC24.36■■□□□ 1.49
Tdp1Q8BJ37 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC24.36■■□□□ 1.49
Tdp1Q8BJ37 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Tdp1Q8BJ37 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Tdp1Q8BJ37 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Tdp1Q8BJ37 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC24.35■■□□□ 1.49
Tdp1Q8BJ37 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Tdp1Q8BJ37 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Tdp1Q8BJ37 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Tdp1Q8BJ37 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC24.34■■□□□ 1.49
Tdp1Q8BJ37 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
Tdp1Q8BJ37 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC24.34■■□□□ 1.49
Tdp1Q8BJ37 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
Tdp1Q8BJ37 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Tdp1Q8BJ37 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Tdp1Q8BJ37 AC117245.4-201ENSMUST00000217388 1646 ntBASIC24.33■■□□□ 1.49
Tdp1Q8BJ37 Gm7417-201ENSMUST00000192950 473 ntBASIC24.33■■□□□ 1.49
Tdp1Q8BJ37 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Tdp1Q8BJ37 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Tdp1Q8BJ37 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Tdp1Q8BJ37 Gm42699-201ENSMUST00000198104 1657 ntBASIC24.32■■□□□ 1.48
Tdp1Q8BJ37 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC24.32■■□□□ 1.48
Tdp1Q8BJ37 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC24.32■■□□□ 1.48
Tdp1Q8BJ37 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Tdp1Q8BJ37 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC24.32■■□□□ 1.48
Tdp1Q8BJ37 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC24.32■■□□□ 1.48
Tdp1Q8BJ37 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Tdp1Q8BJ37 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Tdp1Q8BJ37 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC24.29■■□□□ 1.48
Tdp1Q8BJ37 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC24.29■■□□□ 1.48
Tdp1Q8BJ37 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Tdp1Q8BJ37 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Tdp1Q8BJ37 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Tdp1Q8BJ37 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Tdp1Q8BJ37 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Tdp1Q8BJ37 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Tdp1Q8BJ37 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC24.27■■□□□ 1.48
Tdp1Q8BJ37 Nsd1-206ENSMUST00000224918 1001 ntBASIC24.27■■□□□ 1.48
Tdp1Q8BJ37 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Tdp1Q8BJ37 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Tdp1Q8BJ37 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Tdp1Q8BJ37 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
Tdp1Q8BJ37 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
Tdp1Q8BJ37 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Tdp1Q8BJ37 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Tdp1Q8BJ37 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC24.25■■□□□ 1.47
Tdp1Q8BJ37 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
Tdp1Q8BJ37 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC24.25■■□□□ 1.47
Tdp1Q8BJ37 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Tdp1Q8BJ37 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Tdp1Q8BJ37 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Tdp1Q8BJ37 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Tdp1Q8BJ37 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Tdp1Q8BJ37 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Tdp1Q8BJ37 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC24.24■■□□□ 1.47
Tdp1Q8BJ37 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC24.23■■□□□ 1.47
Tdp1Q8BJ37 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC24.23■■□□□ 1.47
Tdp1Q8BJ37 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Tdp1Q8BJ37 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
Tdp1Q8BJ37 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Tdp1Q8BJ37 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Tdp1Q8BJ37 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC24.22■■□□□ 1.47
Tdp1Q8BJ37 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Tdp1Q8BJ37 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Tdp1Q8BJ37 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Tdp1Q8BJ37 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Tdp1Q8BJ37 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Tdp1Q8BJ37 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
Tdp1Q8BJ37 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Tdp1Q8BJ37 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Tdp1Q8BJ37 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Tdp1Q8BJ37 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC24.19■■□□□ 1.46
Tdp1Q8BJ37 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC24.19■■□□□ 1.46
Tdp1Q8BJ37 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Tdp1Q8BJ37 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Tdp1Q8BJ37 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Tdp1Q8BJ37 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC24.19■■□□□ 1.46
Tdp1Q8BJ37 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC24.19■■□□□ 1.46
Tdp1Q8BJ37 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Tdp1Q8BJ37 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Tdp1Q8BJ37 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Tdp1Q8BJ37 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC24.18■■□□□ 1.46
Tdp1Q8BJ37 Gm40881-201ENSMUST00000223397 166 ntBASIC24.18■■□□□ 1.46
Tdp1Q8BJ37 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Tdp1Q8BJ37 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Tdp1Q8BJ37 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC24.17■■□□□ 1.46
Tdp1Q8BJ37 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
Tdp1Q8BJ37 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Tdp1Q8BJ37 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms