Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Slc5a7Q8BGY9 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC19.06■□□□□ 0.64
Slc5a7Q8BGY9 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slc5a7Q8BGY9 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Slc5a7Q8BGY9 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slc5a7Q8BGY9 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slc5a7Q8BGY9 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Slc5a7Q8BGY9 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Slc5a7Q8BGY9 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Slc5a7Q8BGY9 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Slc5a7Q8BGY9 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.05■□□□□ 0.64
Slc5a7Q8BGY9 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slc5a7Q8BGY9 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slc5a7Q8BGY9 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slc5a7Q8BGY9 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slc5a7Q8BGY9 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Slc5a7Q8BGY9 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Slc5a7Q8BGY9 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Slc5a7Q8BGY9 Gm22567-201ENSMUST00000175542 342 ntBASIC19.03■□□□□ 0.64
Slc5a7Q8BGY9 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Slc5a7Q8BGY9 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Slc5a7Q8BGY9 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.02■□□□□ 0.64
Slc5a7Q8BGY9 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Slc5a7Q8BGY9 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Slc5a7Q8BGY9 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Slc5a7Q8BGY9 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Slc5a7Q8BGY9 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Slc5a7Q8BGY9 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Slc5a7Q8BGY9 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slc5a7Q8BGY9 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Slc5a7Q8BGY9 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slc5a7Q8BGY9 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slc5a7Q8BGY9 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slc5a7Q8BGY9 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slc5a7Q8BGY9 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slc5a7Q8BGY9 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Slc5a7Q8BGY9 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slc5a7Q8BGY9 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
Slc5a7Q8BGY9 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Slc5a7Q8BGY9 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Slc5a7Q8BGY9 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19■□□□□ 0.63
Slc5a7Q8BGY9 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Slc5a7Q8BGY9 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Slc5a7Q8BGY9 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Slc5a7Q8BGY9 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Slc5a7Q8BGY9 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Slc5a7Q8BGY9 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Slc5a7Q8BGY9 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Slc5a7Q8BGY9 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Slc5a7Q8BGY9 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Slc5a7Q8BGY9 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Slc5a7Q8BGY9 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Slc5a7Q8BGY9 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Slc5a7Q8BGY9 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Slc5a7Q8BGY9 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Slc5a7Q8BGY9 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Slc5a7Q8BGY9 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Slc5a7Q8BGY9 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
Slc5a7Q8BGY9 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Slc5a7Q8BGY9 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Slc5a7Q8BGY9 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Slc5a7Q8BGY9 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Slc5a7Q8BGY9 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Slc5a7Q8BGY9 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Slc5a7Q8BGY9 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Slc5a7Q8BGY9 Tdp2-203ENSMUST00000223804 1136 ntBASIC18.97■□□□□ 0.63
Slc5a7Q8BGY9 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Slc5a7Q8BGY9 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Slc5a7Q8BGY9 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Slc5a7Q8BGY9 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Slc5a7Q8BGY9 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
Slc5a7Q8BGY9 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.96■□□□□ 0.63
Slc5a7Q8BGY9 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Slc5a7Q8BGY9 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Slc5a7Q8BGY9 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Slc5a7Q8BGY9 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Slc5a7Q8BGY9 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Slc5a7Q8BGY9 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Slc5a7Q8BGY9 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC18.94■□□□□ 0.62
Slc5a7Q8BGY9 Gm45855-201ENSMUST00000212546 880 ntBASIC18.94■□□□□ 0.62
Slc5a7Q8BGY9 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
Slc5a7Q8BGY9 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Slc5a7Q8BGY9 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Slc5a7Q8BGY9 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slc5a7Q8BGY9 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC18.93■□□□□ 0.62
Slc5a7Q8BGY9 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slc5a7Q8BGY9 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Slc5a7Q8BGY9 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Slc5a7Q8BGY9 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slc5a7Q8BGY9 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slc5a7Q8BGY9 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slc5a7Q8BGY9 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slc5a7Q8BGY9 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slc5a7Q8BGY9 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.92■□□□□ 0.62
Slc5a7Q8BGY9 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slc5a7Q8BGY9 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slc5a7Q8BGY9 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.91■□□□□ 0.62
Slc5a7Q8BGY9 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Slc5a7Q8BGY9 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Slc5a7Q8BGY9 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms