Protein–RNA interactions for Protein: Q8BGN5

Nipal3, NIPA-like protein 3, mousemouse

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nipal3Q8BGN5 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nipal3Q8BGN5 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Nipal3Q8BGN5 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nipal3Q8BGN5 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nipal3Q8BGN5 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nipal3Q8BGN5 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nipal3Q8BGN5 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.45■□□□□ 0.86
Nipal3Q8BGN5 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nipal3Q8BGN5 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nipal3Q8BGN5 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Nipal3Q8BGN5 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nipal3Q8BGN5 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.45■□□□□ 0.86
Nipal3Q8BGN5 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nipal3Q8BGN5 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Nipal3Q8BGN5 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nipal3Q8BGN5 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Nipal3Q8BGN5 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.44■□□□□ 0.86
Nipal3Q8BGN5 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.44■□□□□ 0.86
Nipal3Q8BGN5 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nipal3Q8BGN5 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nipal3Q8BGN5 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nipal3Q8BGN5 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nipal3Q8BGN5 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nipal3Q8BGN5 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nipal3Q8BGN5 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nipal3Q8BGN5 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nipal3Q8BGN5 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.43■□□□□ 0.86
Nipal3Q8BGN5 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Nipal3Q8BGN5 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Nipal3Q8BGN5 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Nipal3Q8BGN5 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Nipal3Q8BGN5 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Nipal3Q8BGN5 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nipal3Q8BGN5 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nipal3Q8BGN5 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Nipal3Q8BGN5 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.41■□□□□ 0.86
Nipal3Q8BGN5 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Nipal3Q8BGN5 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nipal3Q8BGN5 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nipal3Q8BGN5 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.4■□□□□ 0.86
Nipal3Q8BGN5 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Nipal3Q8BGN5 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Nipal3Q8BGN5 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Nipal3Q8BGN5 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Nipal3Q8BGN5 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nipal3Q8BGN5 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Nipal3Q8BGN5 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
Nipal3Q8BGN5 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Nipal3Q8BGN5 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Nipal3Q8BGN5 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nipal3Q8BGN5 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.39■□□□□ 0.85
Nipal3Q8BGN5 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.39■□□□□ 0.85
Nipal3Q8BGN5 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.39■□□□□ 0.85
Nipal3Q8BGN5 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nipal3Q8BGN5 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nipal3Q8BGN5 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nipal3Q8BGN5 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Nipal3Q8BGN5 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Nipal3Q8BGN5 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Nipal3Q8BGN5 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nipal3Q8BGN5 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nipal3Q8BGN5 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Nipal3Q8BGN5 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nipal3Q8BGN5 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Nipal3Q8BGN5 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.37■□□□□ 0.85
Nipal3Q8BGN5 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nipal3Q8BGN5 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Nipal3Q8BGN5 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nipal3Q8BGN5 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nipal3Q8BGN5 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nipal3Q8BGN5 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nipal3Q8BGN5 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
Nipal3Q8BGN5 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.35■□□□□ 0.85
Nipal3Q8BGN5 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Nipal3Q8BGN5 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nipal3Q8BGN5 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nipal3Q8BGN5 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Nipal3Q8BGN5 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Nipal3Q8BGN5 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nipal3Q8BGN5 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Nipal3Q8BGN5 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nipal3Q8BGN5 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.34■□□□□ 0.85
Nipal3Q8BGN5 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nipal3Q8BGN5 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.33■□□□□ 0.85
Nipal3Q8BGN5 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nipal3Q8BGN5 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nipal3Q8BGN5 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nipal3Q8BGN5 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nipal3Q8BGN5 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nipal3Q8BGN5 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nipal3Q8BGN5 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nipal3Q8BGN5 Gm10420-201ENSMUST00000121713 882 ntBASIC20.31■□□□□ 0.84
Nipal3Q8BGN5 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.31■□□□□ 0.84
Nipal3Q8BGN5 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Nipal3Q8BGN5 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nipal3Q8BGN5 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nipal3Q8BGN5 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Nipal3Q8BGN5 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Nipal3Q8BGN5 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nipal3Q8BGN5 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms