Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Samm50Q8BGH2 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Samm50Q8BGH2 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Samm50Q8BGH2 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC25.4■■□□□ 1.66
Samm50Q8BGH2 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Samm50Q8BGH2 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Samm50Q8BGH2 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Samm50Q8BGH2 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC25.4■■□□□ 1.66
Samm50Q8BGH2 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
Samm50Q8BGH2 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Samm50Q8BGH2 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Samm50Q8BGH2 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Samm50Q8BGH2 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Samm50Q8BGH2 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Samm50Q8BGH2 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC25.39■■□□□ 1.65
Samm50Q8BGH2 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Samm50Q8BGH2 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.65
Samm50Q8BGH2 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.65
Samm50Q8BGH2 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Samm50Q8BGH2 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC25.38■■□□□ 1.65
Samm50Q8BGH2 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
Samm50Q8BGH2 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Samm50Q8BGH2 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Samm50Q8BGH2 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC25.38■■□□□ 1.65
Samm50Q8BGH2 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
Samm50Q8BGH2 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Samm50Q8BGH2 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC25.37■■□□□ 1.65
Samm50Q8BGH2 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC25.37■■□□□ 1.65
Samm50Q8BGH2 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Samm50Q8BGH2 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
Samm50Q8BGH2 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC25.36■■□□□ 1.65
Samm50Q8BGH2 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Samm50Q8BGH2 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Samm50Q8BGH2 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Samm50Q8BGH2 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
Samm50Q8BGH2 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Samm50Q8BGH2 Gm13042-201ENSMUST00000119244 1955 ntBASIC25.35■■□□□ 1.65
Samm50Q8BGH2 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Samm50Q8BGH2 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Samm50Q8BGH2 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
Samm50Q8BGH2 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC25.34■■□□□ 1.65
Samm50Q8BGH2 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
Samm50Q8BGH2 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Samm50Q8BGH2 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
Samm50Q8BGH2 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Samm50Q8BGH2 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
Samm50Q8BGH2 AC164433.2-201ENSMUST00000226346 1701 ntBASIC25.33■■□□□ 1.65
Samm50Q8BGH2 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Samm50Q8BGH2 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Samm50Q8BGH2 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
Samm50Q8BGH2 Gm14523-201ENSMUST00000117260 558 ntBASIC25.32■■□□□ 1.64
Samm50Q8BGH2 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC25.32■■□□□ 1.64
Samm50Q8BGH2 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
Samm50Q8BGH2 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC25.32■■□□□ 1.64
Samm50Q8BGH2 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
Samm50Q8BGH2 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Samm50Q8BGH2 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Samm50Q8BGH2 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC25.32■■□□□ 1.64
Samm50Q8BGH2 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Samm50Q8BGH2 Gm7332-201ENSMUST00000118351 454 ntBASIC25.31■■□□□ 1.64
Samm50Q8BGH2 AC151971.4-201ENSMUST00000214717 704 ntBASIC25.31■■□□□ 1.64
Samm50Q8BGH2 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
Samm50Q8BGH2 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
Samm50Q8BGH2 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
Samm50Q8BGH2 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC25.3■■□□□ 1.64
Samm50Q8BGH2 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Samm50Q8BGH2 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC25.29■■□□□ 1.64
Samm50Q8BGH2 Gm44428-201ENSMUST00000204474 874 ntBASIC25.29■■□□□ 1.64
Samm50Q8BGH2 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Samm50Q8BGH2 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
Samm50Q8BGH2 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Samm50Q8BGH2 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Samm50Q8BGH2 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC25.28■■□□□ 1.64
Samm50Q8BGH2 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Samm50Q8BGH2 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Samm50Q8BGH2 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Samm50Q8BGH2 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
Samm50Q8BGH2 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
Samm50Q8BGH2 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
Samm50Q8BGH2 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Samm50Q8BGH2 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Samm50Q8BGH2 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC25.26■■□□□ 1.63
Samm50Q8BGH2 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Samm50Q8BGH2 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC25.25■■□□□ 1.63
Samm50Q8BGH2 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Samm50Q8BGH2 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Samm50Q8BGH2 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Samm50Q8BGH2 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Samm50Q8BGH2 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Samm50Q8BGH2 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
Samm50Q8BGH2 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
Samm50Q8BGH2 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Samm50Q8BGH2 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
Samm50Q8BGH2 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC25.23■■□□□ 1.63
Samm50Q8BGH2 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Samm50Q8BGH2 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Samm50Q8BGH2 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC25.23■■□□□ 1.63
Samm50Q8BGH2 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Samm50Q8BGH2 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
Samm50Q8BGH2 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC25.22■■□□□ 1.63
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms