Protein–RNA interactions for Protein: Q8BFS6

Cpped1, Serine/threonine-protein phosphatase CPPED1, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpped1Q8BFS6 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.27■■□□□ 1
Cpped1Q8BFS6 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.27■■□□□ 1
Cpped1Q8BFS6 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cpped1Q8BFS6 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Cpped1Q8BFS6 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Cpped1Q8BFS6 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cpped1Q8BFS6 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Cpped1Q8BFS6 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Cpped1Q8BFS6 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cpped1Q8BFS6 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.26■□□□□ 0.99
Cpped1Q8BFS6 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cpped1Q8BFS6 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cpped1Q8BFS6 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cpped1Q8BFS6 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.24■□□□□ 0.99
Cpped1Q8BFS6 Gm10420-201ENSMUST00000121713 882 ntBASIC21.24■□□□□ 0.99
Cpped1Q8BFS6 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.24■□□□□ 0.99
Cpped1Q8BFS6 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cpped1Q8BFS6 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.24■□□□□ 0.99
Cpped1Q8BFS6 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Cpped1Q8BFS6 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cpped1Q8BFS6 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cpped1Q8BFS6 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cpped1Q8BFS6 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cpped1Q8BFS6 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cpped1Q8BFS6 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Cpped1Q8BFS6 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cpped1Q8BFS6 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cpped1Q8BFS6 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cpped1Q8BFS6 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.21■□□□□ 0.99
Cpped1Q8BFS6 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cpped1Q8BFS6 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cpped1Q8BFS6 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Cpped1Q8BFS6 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cpped1Q8BFS6 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cpped1Q8BFS6 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cpped1Q8BFS6 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cpped1Q8BFS6 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cpped1Q8BFS6 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cpped1Q8BFS6 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.2■□□□□ 0.98
Cpped1Q8BFS6 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cpped1Q8BFS6 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cpped1Q8BFS6 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cpped1Q8BFS6 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Cpped1Q8BFS6 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cpped1Q8BFS6 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cpped1Q8BFS6 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cpped1Q8BFS6 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cpped1Q8BFS6 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cpped1Q8BFS6 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cpped1Q8BFS6 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cpped1Q8BFS6 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Cpped1Q8BFS6 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cpped1Q8BFS6 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
Cpped1Q8BFS6 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Cpped1Q8BFS6 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cpped1Q8BFS6 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cpped1Q8BFS6 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Cpped1Q8BFS6 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cpped1Q8BFS6 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cpped1Q8BFS6 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cpped1Q8BFS6 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.16■□□□□ 0.98
Cpped1Q8BFS6 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cpped1Q8BFS6 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.15■□□□□ 0.98
Cpped1Q8BFS6 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cpped1Q8BFS6 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cpped1Q8BFS6 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Cpped1Q8BFS6 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cpped1Q8BFS6 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Cpped1Q8BFS6 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Cpped1Q8BFS6 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Cpped1Q8BFS6 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Cpped1Q8BFS6 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.14■□□□□ 0.97
Cpped1Q8BFS6 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cpped1Q8BFS6 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cpped1Q8BFS6 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Cpped1Q8BFS6 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Cpped1Q8BFS6 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cpped1Q8BFS6 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cpped1Q8BFS6 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Cpped1Q8BFS6 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cpped1Q8BFS6 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.13■□□□□ 0.97
Cpped1Q8BFS6 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Cpped1Q8BFS6 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Cpped1Q8BFS6 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cpped1Q8BFS6 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cpped1Q8BFS6 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.12■□□□□ 0.97
Cpped1Q8BFS6 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cpped1Q8BFS6 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cpped1Q8BFS6 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cpped1Q8BFS6 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cpped1Q8BFS6 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cpped1Q8BFS6 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.12■□□□□ 0.97
Cpped1Q8BFS6 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cpped1Q8BFS6 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cpped1Q8BFS6 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Cpped1Q8BFS6 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Cpped1Q8BFS6 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cpped1Q8BFS6 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cpped1Q8BFS6 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cpped1Q8BFS6 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms