Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Pif1Q80SX8 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pif1Q80SX8 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pif1Q80SX8 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Pif1Q80SX8 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pif1Q80SX8 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pif1Q80SX8 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pif1Q80SX8 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
Pif1Q80SX8 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Pif1Q80SX8 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pif1Q80SX8 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pif1Q80SX8 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pif1Q80SX8 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Pif1Q80SX8 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pif1Q80SX8 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pif1Q80SX8 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pif1Q80SX8 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.02■□□□□ 0.8
Pif1Q80SX8 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.02■□□□□ 0.8
Pif1Q80SX8 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Pif1Q80SX8 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pif1Q80SX8 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pif1Q80SX8 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.01■□□□□ 0.79
Pif1Q80SX8 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.01■□□□□ 0.79
Pif1Q80SX8 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.01■□□□□ 0.79
Pif1Q80SX8 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.01■□□□□ 0.79
Pif1Q80SX8 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.01■□□□□ 0.79
Pif1Q80SX8 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
Pif1Q80SX8 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.01■□□□□ 0.79
Pif1Q80SX8 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pif1Q80SX8 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pif1Q80SX8 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pif1Q80SX8 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pif1Q80SX8 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Pif1Q80SX8 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20■□□□□ 0.79
Pif1Q80SX8 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20■□□□□ 0.79
Pif1Q80SX8 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20■□□□□ 0.79
Pif1Q80SX8 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pif1Q80SX8 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pif1Q80SX8 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Pif1Q80SX8 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pif1Q80SX8 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pif1Q80SX8 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pif1Q80SX8 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20■□□□□ 0.79
Pif1Q80SX8 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pif1Q80SX8 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pif1Q80SX8 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.99■□□□□ 0.79
Pif1Q80SX8 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.98■□□□□ 0.79
Pif1Q80SX8 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pif1Q80SX8 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pif1Q80SX8 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Pif1Q80SX8 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Pif1Q80SX8 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pif1Q80SX8 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Pif1Q80SX8 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.97■□□□□ 0.79
Pif1Q80SX8 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pif1Q80SX8 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Pif1Q80SX8 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pif1Q80SX8 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pif1Q80SX8 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pif1Q80SX8 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pif1Q80SX8 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.96■□□□□ 0.79
Pif1Q80SX8 Gm7417-201ENSMUST00000192950 473 ntBASIC19.96■□□□□ 0.79
Pif1Q80SX8 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.96■□□□□ 0.79
Pif1Q80SX8 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Pif1Q80SX8 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.96■□□□□ 0.79
Pif1Q80SX8 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pif1Q80SX8 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pif1Q80SX8 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Pif1Q80SX8 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Pif1Q80SX8 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pif1Q80SX8 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pif1Q80SX8 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.95■□□□□ 0.78
Pif1Q80SX8 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pif1Q80SX8 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pif1Q80SX8 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pif1Q80SX8 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pif1Q80SX8 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pif1Q80SX8 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pif1Q80SX8 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Pif1Q80SX8 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.93■□□□□ 0.78
Pif1Q80SX8 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.93■□□□□ 0.78
Pif1Q80SX8 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pif1Q80SX8 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pif1Q80SX8 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Pif1Q80SX8 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pif1Q80SX8 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pif1Q80SX8 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.92■□□□□ 0.78
Pif1Q80SX8 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.92■□□□□ 0.78
Pif1Q80SX8 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pif1Q80SX8 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Pif1Q80SX8 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pif1Q80SX8 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.92■□□□□ 0.78
Pif1Q80SX8 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.92■□□□□ 0.78
Pif1Q80SX8 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pif1Q80SX8 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pif1Q80SX8 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pif1Q80SX8 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pif1Q80SX8 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.91■□□□□ 0.78
Pif1Q80SX8 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.91■□□□□ 0.78
Pif1Q80SX8 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms