Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm42501-201ENSMUST00000200220 1026 ntBASIC26.38■■□□□ 1.81
Nup98Q6PFD9 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
Nup98Q6PFD9 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Nup98Q6PFD9 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
Nup98Q6PFD9 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Nup98Q6PFD9 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Nup98Q6PFD9 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Nup98Q6PFD9 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC26.36■■□□□ 1.81
Nup98Q6PFD9 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Nup98Q6PFD9 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Nup98Q6PFD9 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Nup98Q6PFD9 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC26.35■■□□□ 1.81
Nup98Q6PFD9 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
Nup98Q6PFD9 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC26.35■■□□□ 1.81
Nup98Q6PFD9 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Nup98Q6PFD9 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC26.34■■□□□ 1.81
Nup98Q6PFD9 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Nup98Q6PFD9 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Nup98Q6PFD9 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC26.33■■□□□ 1.81
Nup98Q6PFD9 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Nup98Q6PFD9 Gm5131-201ENSMUST00000212776 1238 ntBASIC26.33■■□□□ 1.81
Nup98Q6PFD9 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC26.33■■□□□ 1.81
Nup98Q6PFD9 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Nup98Q6PFD9 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC26.33■■□□□ 1.81
Nup98Q6PFD9 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Nup98Q6PFD9 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Nup98Q6PFD9 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
Nup98Q6PFD9 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Nup98Q6PFD9 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Nup98Q6PFD9 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Nup98Q6PFD9 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Nup98Q6PFD9 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Nup98Q6PFD9 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Nup98Q6PFD9 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Nup98Q6PFD9 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Nup98Q6PFD9 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
Nup98Q6PFD9 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Nup98Q6PFD9 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC26.29■■□□□ 1.8
Nup98Q6PFD9 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Nup98Q6PFD9 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Nup98Q6PFD9 Gm16464-201ENSMUST00000117815 1095 ntBASIC26.28■■□□□ 1.8
Nup98Q6PFD9 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC26.28■■□□□ 1.8
Nup98Q6PFD9 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Nup98Q6PFD9 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Nup98Q6PFD9 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Nup98Q6PFD9 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC26.27■■□□□ 1.8
Nup98Q6PFD9 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC26.27■■□□□ 1.8
Nup98Q6PFD9 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Nup98Q6PFD9 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Nup98Q6PFD9 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Nup98Q6PFD9 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Nup98Q6PFD9 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Nup98Q6PFD9 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Nup98Q6PFD9 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Nup98Q6PFD9 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Nup98Q6PFD9 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC26.25■■□□□ 1.79
Nup98Q6PFD9 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Nup98Q6PFD9 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC26.25■■□□□ 1.79
Nup98Q6PFD9 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Nup98Q6PFD9 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Nup98Q6PFD9 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Nup98Q6PFD9 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Nup98Q6PFD9 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC26.23■■□□□ 1.79
Nup98Q6PFD9 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
Nup98Q6PFD9 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Nup98Q6PFD9 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC26.23■■□□□ 1.79
Nup98Q6PFD9 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Nup98Q6PFD9 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Nup98Q6PFD9 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Nup98Q6PFD9 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Nup98Q6PFD9 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Nup98Q6PFD9 Gm6934-201ENSMUST00000194780 1905 ntBASIC26.21■■□□□ 1.79
Nup98Q6PFD9 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Nup98Q6PFD9 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Nup98Q6PFD9 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Nup98Q6PFD9 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Nup98Q6PFD9 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Nup98Q6PFD9 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Nup98Q6PFD9 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.78
Nup98Q6PFD9 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
Nup98Q6PFD9 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Nup98Q6PFD9 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC26.19■■□□□ 1.78
Nup98Q6PFD9 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Nup98Q6PFD9 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Nup98Q6PFD9 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Nup98Q6PFD9 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Nup98Q6PFD9 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Nup98Q6PFD9 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC26.17■■□□□ 1.78
Nup98Q6PFD9 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC26.16■■□□□ 1.78
Nup98Q6PFD9 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC26.16■■□□□ 1.78
Nup98Q6PFD9 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Nup98Q6PFD9 Gm11847-201ENSMUST00000125165 1119 ntBASIC26.15■■□□□ 1.78
Nup98Q6PFD9 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC26.15■■□□□ 1.78
Nup98Q6PFD9 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC26.15■■□□□ 1.78
Nup98Q6PFD9 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
Nup98Q6PFD9 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Nup98Q6PFD9 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Nup98Q6PFD9 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC26.14■■□□□ 1.78
Nup98Q6PFD9 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC26.14■■□□□ 1.77
Nup98Q6PFD9 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC26.14■■□□□ 1.77
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms