Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC27.8■■■□□ 2.04
Clcn1Q64347 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC27.8■■■□□ 2.04
Clcn1Q64347 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
Clcn1Q64347 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
Clcn1Q64347 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC27.79■■■□□ 2.04
Clcn1Q64347 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC27.79■■■□□ 2.04
Clcn1Q64347 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
Clcn1Q64347 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC27.79■■■□□ 2.04
Clcn1Q64347 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
Clcn1Q64347 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC27.78■■■□□ 2.04
Clcn1Q64347 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Clcn1Q64347 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Clcn1Q64347 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Clcn1Q64347 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC27.78■■■□□ 2.04
Clcn1Q64347 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Clcn1Q64347 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Clcn1Q64347 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC27.77■■■□□ 2.04
Clcn1Q64347 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC27.77■■■□□ 2.04
Clcn1Q64347 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Clcn1Q64347 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC27.77■■■□□ 2.04
Clcn1Q64347 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Clcn1Q64347 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
Clcn1Q64347 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC27.76■■■□□ 2.03
Clcn1Q64347 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC27.76■■■□□ 2.03
Clcn1Q64347 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
Clcn1Q64347 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Clcn1Q64347 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC27.74■■■□□ 2.03
Clcn1Q64347 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC27.74■■■□□ 2.03
Clcn1Q64347 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC27.74■■■□□ 2.03
Clcn1Q64347 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC27.74■■■□□ 2.03
Clcn1Q64347 Gm16464-201ENSMUST00000117815 1095 ntBASIC27.74■■■□□ 2.03
Clcn1Q64347 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Clcn1Q64347 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC27.74■■■□□ 2.03
Clcn1Q64347 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Clcn1Q64347 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Clcn1Q64347 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC27.72■■■□□ 2.03
Clcn1Q64347 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC27.72■■■□□ 2.03
Clcn1Q64347 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC27.72■■■□□ 2.03
Clcn1Q64347 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC27.72■■■□□ 2.03
Clcn1Q64347 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC27.72■■■□□ 2.03
Clcn1Q64347 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Clcn1Q64347 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Clcn1Q64347 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Clcn1Q64347 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC27.71■■■□□ 2.03
Clcn1Q64347 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Clcn1Q64347 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
Clcn1Q64347 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC27.71■■■□□ 2.03
Clcn1Q64347 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC27.71■■■□□ 2.03
Clcn1Q64347 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC27.7■■■□□ 2.03
Clcn1Q64347 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC27.7■■■□□ 2.02
Clcn1Q64347 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
Clcn1Q64347 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC27.7■■■□□ 2.02
Clcn1Q64347 AC153524.1-201ENSMUST00000220436 1935 ntBASIC27.7■■■□□ 2.02
Clcn1Q64347 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
Clcn1Q64347 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Clcn1Q64347 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC27.69■■■□□ 2.02
Clcn1Q64347 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC27.69■■■□□ 2.02
Clcn1Q64347 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Clcn1Q64347 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC27.69■■■□□ 2.02
Clcn1Q64347 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Clcn1Q64347 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Clcn1Q64347 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC27.68■■■□□ 2.02
Clcn1Q64347 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Clcn1Q64347 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC27.67■■■□□ 2.02
Clcn1Q64347 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
Clcn1Q64347 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC27.67■■■□□ 2.02
Clcn1Q64347 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC27.66■■■□□ 2.02
Clcn1Q64347 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC27.66■■■□□ 2.02
Clcn1Q64347 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC27.66■■■□□ 2.02
Clcn1Q64347 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
Clcn1Q64347 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Clcn1Q64347 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC27.65■■■□□ 2.02
Clcn1Q64347 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Clcn1Q64347 Gm7417-201ENSMUST00000192950 473 ntBASIC27.65■■■□□ 2.02
Clcn1Q64347 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Clcn1Q64347 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Clcn1Q64347 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC27.65■■■□□ 2.02
Clcn1Q64347 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
Clcn1Q64347 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC27.64■■■□□ 2.01
Clcn1Q64347 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Clcn1Q64347 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Clcn1Q64347 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC27.63■■■□□ 2.01
Clcn1Q64347 Gm28536-201ENSMUST00000190971 1317 ntBASIC27.63■■■□□ 2.01
Clcn1Q64347 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Clcn1Q64347 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC27.62■■■□□ 2.01
Clcn1Q64347 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC27.62■■■□□ 2.01
Clcn1Q64347 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC27.62■■■□□ 2.01
Clcn1Q64347 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC27.62■■■□□ 2.01
Clcn1Q64347 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Clcn1Q64347 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC27.6■■■□□ 2.01
Clcn1Q64347 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Clcn1Q64347 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Clcn1Q64347 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Clcn1Q64347 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Clcn1Q64347 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Clcn1Q64347 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC27.59■■■□□ 2.01
Clcn1Q64347 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Clcn1Q64347 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC27.58■■■□□ 2.01
Clcn1Q64347 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC27.58■■■□□ 2.01
Clcn1Q64347 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC27.58■■■□□ 2.01
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms