Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clcn4Q61418 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clcn4Q61418 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clcn4Q61418 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Clcn4Q61418 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Clcn4Q61418 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clcn4Q61418 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Clcn4Q61418 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.89■□□□□ 0.77
Clcn4Q61418 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Clcn4Q61418 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clcn4Q61418 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clcn4Q61418 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Clcn4Q61418 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Clcn4Q61418 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Clcn4Q61418 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clcn4Q61418 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clcn4Q61418 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.88■□□□□ 0.77
Clcn4Q61418 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clcn4Q61418 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clcn4Q61418 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clcn4Q61418 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.87■□□□□ 0.77
Clcn4Q61418 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.87■□□□□ 0.77
Clcn4Q61418 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clcn4Q61418 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.87■□□□□ 0.77
Clcn4Q61418 Gm12366-201ENSMUST00000121722 873 ntBASIC19.87■□□□□ 0.77
Clcn4Q61418 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.87■□□□□ 0.77
Clcn4Q61418 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.87■□□□□ 0.77
Clcn4Q61418 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clcn4Q61418 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.87■□□□□ 0.77
Clcn4Q61418 Gm5786-201ENSMUST00000085368 882 ntBASIC19.87■□□□□ 0.77
Clcn4Q61418 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clcn4Q61418 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.87■□□□□ 0.77
Clcn4Q61418 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clcn4Q61418 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clcn4Q61418 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clcn4Q61418 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clcn4Q61418 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.86■□□□□ 0.77
Clcn4Q61418 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Clcn4Q61418 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clcn4Q61418 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Clcn4Q61418 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Clcn4Q61418 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Clcn4Q61418 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Clcn4Q61418 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clcn4Q61418 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.85■□□□□ 0.77
Clcn4Q61418 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.85■□□□□ 0.77
Clcn4Q61418 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clcn4Q61418 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
Clcn4Q61418 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clcn4Q61418 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.85■□□□□ 0.77
Clcn4Q61418 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.85■□□□□ 0.77
Clcn4Q61418 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Clcn4Q61418 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.84■□□□□ 0.77
Clcn4Q61418 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clcn4Q61418 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clcn4Q61418 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clcn4Q61418 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Clcn4Q61418 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clcn4Q61418 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clcn4Q61418 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.84■□□□□ 0.77
Clcn4Q61418 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
Clcn4Q61418 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.84■□□□□ 0.77
Clcn4Q61418 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clcn4Q61418 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.83■□□□□ 0.77
Clcn4Q61418 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Clcn4Q61418 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Clcn4Q61418 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.83■□□□□ 0.77
Clcn4Q61418 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Clcn4Q61418 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Clcn4Q61418 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Clcn4Q61418 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Clcn4Q61418 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.83■□□□□ 0.76
Clcn4Q61418 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Clcn4Q61418 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Clcn4Q61418 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Clcn4Q61418 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clcn4Q61418 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clcn4Q61418 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.82■□□□□ 0.76
Clcn4Q61418 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clcn4Q61418 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clcn4Q61418 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clcn4Q61418 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clcn4Q61418 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Clcn4Q61418 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clcn4Q61418 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clcn4Q61418 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Clcn4Q61418 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clcn4Q61418 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.81■□□□□ 0.76
Clcn4Q61418 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Clcn4Q61418 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clcn4Q61418 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.8■□□□□ 0.76
Clcn4Q61418 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Clcn4Q61418 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clcn4Q61418 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Clcn4Q61418 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clcn4Q61418 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clcn4Q61418 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Clcn4Q61418 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.79■□□□□ 0.76
Clcn4Q61418 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clcn4Q61418 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms