Protein–RNA interactions for Protein: Q61382

Traf4, TNF receptor-associated factor 4, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf4Q61382 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Traf4Q61382 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Traf4Q61382 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Traf4Q61382 Gm5921-201ENSMUST00000075898 882 ntBASIC19.12■□□□□ 0.65
Traf4Q61382 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Traf4Q61382 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Traf4Q61382 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Traf4Q61382 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Traf4Q61382 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Traf4Q61382 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Traf4Q61382 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Traf4Q61382 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Traf4Q61382 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.1■□□□□ 0.65
Traf4Q61382 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Traf4Q61382 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Traf4Q61382 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Traf4Q61382 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Traf4Q61382 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
Traf4Q61382 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Traf4Q61382 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Traf4Q61382 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.08■□□□□ 0.64
Traf4Q61382 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Traf4Q61382 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
Traf4Q61382 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Traf4Q61382 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Traf4Q61382 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.07■□□□□ 0.64
Traf4Q61382 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Traf4Q61382 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Traf4Q61382 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Traf4Q61382 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Traf4Q61382 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Traf4Q61382 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.05■□□□□ 0.64
Traf4Q61382 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Traf4Q61382 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Traf4Q61382 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Traf4Q61382 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Traf4Q61382 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Traf4Q61382 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Traf4Q61382 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Traf4Q61382 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Traf4Q61382 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Traf4Q61382 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Traf4Q61382 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Traf4Q61382 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Traf4Q61382 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Traf4Q61382 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.03■□□□□ 0.64
Traf4Q61382 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
Traf4Q61382 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Traf4Q61382 Gm5812-201ENSMUST00000061073 957 ntBASIC19.03■□□□□ 0.64
Traf4Q61382 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Traf4Q61382 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Traf4Q61382 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.03■□□□□ 0.64
Traf4Q61382 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Traf4Q61382 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Traf4Q61382 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Traf4Q61382 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.02■□□□□ 0.64
Traf4Q61382 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Traf4Q61382 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Traf4Q61382 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Traf4Q61382 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Traf4Q61382 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Traf4Q61382 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Traf4Q61382 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Traf4Q61382 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Traf4Q61382 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Traf4Q61382 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
Traf4Q61382 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Traf4Q61382 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Traf4Q61382 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Traf4Q61382 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Traf4Q61382 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19■□□□□ 0.63
Traf4Q61382 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19■□□□□ 0.63
Traf4Q61382 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19■□□□□ 0.63
Traf4Q61382 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19■□□□□ 0.63
Traf4Q61382 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Traf4Q61382 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19■□□□□ 0.63
Traf4Q61382 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Traf4Q61382 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Traf4Q61382 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Traf4Q61382 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Traf4Q61382 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Traf4Q61382 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Traf4Q61382 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Traf4Q61382 AC117769.4-201ENSMUST00000225679 685 ntBASIC18.98■□□□□ 0.63
Traf4Q61382 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Traf4Q61382 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
Traf4Q61382 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Traf4Q61382 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Traf4Q61382 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Traf4Q61382 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Traf4Q61382 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
Traf4Q61382 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Traf4Q61382 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Traf4Q61382 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Traf4Q61382 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Traf4Q61382 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Traf4Q61382 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Traf4Q61382 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Traf4Q61382 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Traf4Q61382 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms