Protein–RNA interactions for Protein: Q61080

Foxf1, Forkhead box protein F1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxf1Q61080 Mir6538-201ENSMUST00000183713 110 ntBASIC18.23■□□□□ 0.51
Foxf1Q61080 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Foxf1Q61080 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Foxf1Q61080 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.22■□□□□ 0.51
Foxf1Q61080 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
Foxf1Q61080 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Foxf1Q61080 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Foxf1Q61080 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Foxf1Q61080 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Foxf1Q61080 AC117769.4-201ENSMUST00000225679 685 ntBASIC18.22■□□□□ 0.51
Foxf1Q61080 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Foxf1Q61080 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Foxf1Q61080 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
Foxf1Q61080 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Foxf1Q61080 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Foxf1Q61080 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.21■□□□□ 0.51
Foxf1Q61080 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Foxf1Q61080 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Foxf1Q61080 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Foxf1Q61080 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Foxf1Q61080 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Foxf1Q61080 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Foxf1Q61080 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.2■□□□□ 0.5
Foxf1Q61080 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Foxf1Q61080 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Foxf1Q61080 AC151971.4-201ENSMUST00000214717 704 ntBASIC18.19■□□□□ 0.5
Foxf1Q61080 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
Foxf1Q61080 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Foxf1Q61080 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Foxf1Q61080 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Foxf1Q61080 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Foxf1Q61080 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Foxf1Q61080 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Foxf1Q61080 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Foxf1Q61080 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Foxf1Q61080 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Foxf1Q61080 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Foxf1Q61080 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Foxf1Q61080 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Foxf1Q61080 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Foxf1Q61080 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Foxf1Q61080 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Foxf1Q61080 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Foxf1Q61080 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Foxf1Q61080 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Foxf1Q61080 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Foxf1Q61080 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.17■□□□□ 0.5
Foxf1Q61080 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Foxf1Q61080 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Foxf1Q61080 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Foxf1Q61080 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Foxf1Q61080 Notumos-201ENSMUST00000151998 2659 ntBASIC18.17■□□□□ 0.5
Foxf1Q61080 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Foxf1Q61080 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Foxf1Q61080 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Foxf1Q61080 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Foxf1Q61080 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Foxf1Q61080 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.15■□□□□ 0.5
Foxf1Q61080 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Foxf1Q61080 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Foxf1Q61080 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Foxf1Q61080 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Foxf1Q61080 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Foxf1Q61080 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.14■□□□□ 0.5
Foxf1Q61080 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Foxf1Q61080 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Foxf1Q61080 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Foxf1Q61080 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
Foxf1Q61080 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Foxf1Q61080 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.13■□□□□ 0.49
Foxf1Q61080 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Foxf1Q61080 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Foxf1Q61080 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC18.13■□□□□ 0.49
Foxf1Q61080 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Foxf1Q61080 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC18.13■□□□□ 0.49
Foxf1Q61080 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Foxf1Q61080 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Foxf1Q61080 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Foxf1Q61080 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Foxf1Q61080 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.12■□□□□ 0.49
Foxf1Q61080 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Foxf1Q61080 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.12■□□□□ 0.49
Foxf1Q61080 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Foxf1Q61080 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Foxf1Q61080 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.11■□□□□ 0.49
Foxf1Q61080 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Foxf1Q61080 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Foxf1Q61080 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
Foxf1Q61080 Gm14523-201ENSMUST00000117260 558 ntBASIC18.11■□□□□ 0.49
Foxf1Q61080 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC18.11■□□□□ 0.49
Foxf1Q61080 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Foxf1Q61080 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Foxf1Q61080 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Foxf1Q61080 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Foxf1Q61080 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Foxf1Q61080 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Foxf1Q61080 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Foxf1Q61080 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Foxf1Q61080 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Foxf1Q61080 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms