Protein–RNA interactions for Protein: Q5XFR0

Pabpn1l, Embryonic polyadenylate-binding protein 2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1lQ5XFR0 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pabpn1lQ5XFR0 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Pabpn1lQ5XFR0 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pabpn1lQ5XFR0 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.71■■□□□ 1.07
Pabpn1lQ5XFR0 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Pabpn1lQ5XFR0 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pabpn1lQ5XFR0 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Pabpn1lQ5XFR0 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pabpn1lQ5XFR0 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Pabpn1lQ5XFR0 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pabpn1lQ5XFR0 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Pabpn1lQ5XFR0 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pabpn1lQ5XFR0 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Pabpn1lQ5XFR0 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.66■■□□□ 1.06
Pabpn1lQ5XFR0 Gm9939-201ENSMUST00000067161 1154 ntBASIC21.66■■□□□ 1.06
Pabpn1lQ5XFR0 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.66■■□□□ 1.06
Pabpn1lQ5XFR0 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Pabpn1lQ5XFR0 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pabpn1lQ5XFR0 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pabpn1lQ5XFR0 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pabpn1lQ5XFR0 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pabpn1lQ5XFR0 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pabpn1lQ5XFR0 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.65■■□□□ 1.06
Pabpn1lQ5XFR0 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.64■■□□□ 1.06
Pabpn1lQ5XFR0 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
Pabpn1lQ5XFR0 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.64■■□□□ 1.05
Pabpn1lQ5XFR0 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pabpn1lQ5XFR0 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.64■■□□□ 1.05
Pabpn1lQ5XFR0 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pabpn1lQ5XFR0 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pabpn1lQ5XFR0 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.64■■□□□ 1.05
Pabpn1lQ5XFR0 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pabpn1lQ5XFR0 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Pabpn1lQ5XFR0 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Pabpn1lQ5XFR0 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pabpn1lQ5XFR0 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.63■■□□□ 1.05
Pabpn1lQ5XFR0 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pabpn1lQ5XFR0 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.63■■□□□ 1.05
Pabpn1lQ5XFR0 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pabpn1lQ5XFR0 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pabpn1lQ5XFR0 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pabpn1lQ5XFR0 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pabpn1lQ5XFR0 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pabpn1lQ5XFR0 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Pabpn1lQ5XFR0 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.62■■□□□ 1.05
Pabpn1lQ5XFR0 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pabpn1lQ5XFR0 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Pabpn1lQ5XFR0 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pabpn1lQ5XFR0 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pabpn1lQ5XFR0 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Pabpn1lQ5XFR0 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pabpn1lQ5XFR0 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Pabpn1lQ5XFR0 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.61■■□□□ 1.05
Pabpn1lQ5XFR0 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pabpn1lQ5XFR0 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pabpn1lQ5XFR0 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pabpn1lQ5XFR0 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pabpn1lQ5XFR0 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Pabpn1lQ5XFR0 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Pabpn1lQ5XFR0 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pabpn1lQ5XFR0 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pabpn1lQ5XFR0 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pabpn1lQ5XFR0 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pabpn1lQ5XFR0 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pabpn1lQ5XFR0 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Pabpn1lQ5XFR0 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.58■■□□□ 1.05
Pabpn1lQ5XFR0 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Pabpn1lQ5XFR0 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Pabpn1lQ5XFR0 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pabpn1lQ5XFR0 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Pabpn1lQ5XFR0 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pabpn1lQ5XFR0 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pabpn1lQ5XFR0 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Pabpn1lQ5XFR0 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pabpn1lQ5XFR0 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pabpn1lQ5XFR0 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pabpn1lQ5XFR0 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.55■■□□□ 1.04
Pabpn1lQ5XFR0 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.55■■□□□ 1.04
Pabpn1lQ5XFR0 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pabpn1lQ5XFR0 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
Pabpn1lQ5XFR0 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pabpn1lQ5XFR0 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pabpn1lQ5XFR0 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
Pabpn1lQ5XFR0 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pabpn1lQ5XFR0 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pabpn1lQ5XFR0 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Pabpn1lQ5XFR0 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pabpn1lQ5XFR0 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pabpn1lQ5XFR0 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pabpn1lQ5XFR0 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
Pabpn1lQ5XFR0 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.54■■□□□ 1.04
Pabpn1lQ5XFR0 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Pabpn1lQ5XFR0 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pabpn1lQ5XFR0 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pabpn1lQ5XFR0 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pabpn1lQ5XFR0 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pabpn1lQ5XFR0 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pabpn1lQ5XFR0 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pabpn1lQ5XFR0 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Pabpn1lQ5XFR0 Gm6821-201ENSMUST00000107540 542 ntBASIC21.53■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms