Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Vps13aQ5H8C4 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Vps13aQ5H8C4 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC22.22■■□□□ 1.15
Vps13aQ5H8C4 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Vps13aQ5H8C4 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Vps13aQ5H8C4 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC22.22■■□□□ 1.15
Vps13aQ5H8C4 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Vps13aQ5H8C4 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Vps13aQ5H8C4 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Vps13aQ5H8C4 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Vps13aQ5H8C4 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC22.21■■□□□ 1.15
Vps13aQ5H8C4 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Vps13aQ5H8C4 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Vps13aQ5H8C4 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Vps13aQ5H8C4 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Vps13aQ5H8C4 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
Vps13aQ5H8C4 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Vps13aQ5H8C4 Gm27011-201ENSMUST00000182352 972 ntBASIC22.2■■□□□ 1.14
Vps13aQ5H8C4 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Vps13aQ5H8C4 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Vps13aQ5H8C4 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Vps13aQ5H8C4 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Vps13aQ5H8C4 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC22.19■■□□□ 1.14
Vps13aQ5H8C4 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Vps13aQ5H8C4 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Vps13aQ5H8C4 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Vps13aQ5H8C4 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Vps13aQ5H8C4 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC22.18■■□□□ 1.14
Vps13aQ5H8C4 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Vps13aQ5H8C4 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Vps13aQ5H8C4 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Vps13aQ5H8C4 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Vps13aQ5H8C4 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Vps13aQ5H8C4 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Vps13aQ5H8C4 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC22.16■■□□□ 1.14
Vps13aQ5H8C4 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
Vps13aQ5H8C4 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC22.16■■□□□ 1.14
Vps13aQ5H8C4 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Vps13aQ5H8C4 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC22.15■■□□□ 1.14
Vps13aQ5H8C4 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Vps13aQ5H8C4 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Vps13aQ5H8C4 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC22.14■■□□□ 1.14
Vps13aQ5H8C4 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC22.14■■□□□ 1.14
Vps13aQ5H8C4 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Vps13aQ5H8C4 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Vps13aQ5H8C4 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
Vps13aQ5H8C4 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
Vps13aQ5H8C4 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
Vps13aQ5H8C4 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Vps13aQ5H8C4 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Vps13aQ5H8C4 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Vps13aQ5H8C4 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC22.13■■□□□ 1.13
Vps13aQ5H8C4 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Vps13aQ5H8C4 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
Vps13aQ5H8C4 Gm6139-201ENSMUST00000079261 882 ntBASIC22.12■■□□□ 1.13
Vps13aQ5H8C4 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC22.12■■□□□ 1.13
Vps13aQ5H8C4 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC22.12■■□□□ 1.13
Vps13aQ5H8C4 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Vps13aQ5H8C4 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
Vps13aQ5H8C4 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Vps13aQ5H8C4 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Vps13aQ5H8C4 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Vps13aQ5H8C4 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Vps13aQ5H8C4 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Vps13aQ5H8C4 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC22.11■■□□□ 1.13
Vps13aQ5H8C4 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Vps13aQ5H8C4 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Vps13aQ5H8C4 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Vps13aQ5H8C4 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Vps13aQ5H8C4 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Vps13aQ5H8C4 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Vps13aQ5H8C4 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Vps13aQ5H8C4 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC22.1■■□□□ 1.13
Vps13aQ5H8C4 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Vps13aQ5H8C4 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Vps13aQ5H8C4 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
Vps13aQ5H8C4 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
Vps13aQ5H8C4 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Vps13aQ5H8C4 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Vps13aQ5H8C4 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Vps13aQ5H8C4 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC22.08■■□□□ 1.13
Vps13aQ5H8C4 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC22.08■■□□□ 1.12
Vps13aQ5H8C4 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC22.08■■□□□ 1.12
Vps13aQ5H8C4 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
Vps13aQ5H8C4 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Vps13aQ5H8C4 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Vps13aQ5H8C4 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC22.07■■□□□ 1.12
Vps13aQ5H8C4 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Vps13aQ5H8C4 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC22.07■■□□□ 1.12
Vps13aQ5H8C4 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Vps13aQ5H8C4 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC22.06■■□□□ 1.12
Vps13aQ5H8C4 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC22.06■■□□□ 1.12
Vps13aQ5H8C4 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Vps13aQ5H8C4 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
Vps13aQ5H8C4 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
Vps13aQ5H8C4 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC22.05■■□□□ 1.12
Vps13aQ5H8C4 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Vps13aQ5H8C4 AC112142.1-201ENSMUST00000228796 918 ntBASIC22.05■■□□□ 1.12
Vps13aQ5H8C4 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Vps13aQ5H8C4 Gm28536-201ENSMUST00000190971 1317 ntBASIC22.05■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 109.1 ms