Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC25,9■■□□□ 1,74
Rnf20Q5DTM8 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC25,9■■□□□ 1,74
Rnf20Q5DTM8 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC25,9■■□□□ 1,74
Rnf20Q5DTM8 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC25,89■■□□□ 1,74
Rnf20Q5DTM8 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC25,89■■□□□ 1,74
Rnf20Q5DTM8 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC25,89■■□□□ 1,74
Rnf20Q5DTM8 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC25,89■■□□□ 1,74
Rnf20Q5DTM8 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC25,89■■□□□ 1,73
Rnf20Q5DTM8 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC25,88■■□□□ 1,73
Rnf20Q5DTM8 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC25,88■■□□□ 1,73
Rnf20Q5DTM8 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC25,88■■□□□ 1,73
Rnf20Q5DTM8 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC25,88■■□□□ 1,73
Rnf20Q5DTM8 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC25,88■■□□□ 1,73
Rnf20Q5DTM8 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC25,88■■□□□ 1,73
Rnf20Q5DTM8 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC25,88■■□□□ 1,73
Rnf20Q5DTM8 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC25,87■■□□□ 1,73
Rnf20Q5DTM8 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC25,87■■□□□ 1,73
Rnf20Q5DTM8 Gm14523-201ENSMUST00000117260 558 ntBASIC25,87■■□□□ 1,73
Rnf20Q5DTM8 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC25,87■■□□□ 1,73
Rnf20Q5DTM8 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC25,87■■□□□ 1,73
Rnf20Q5DTM8 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC25,87■■□□□ 1,73
Rnf20Q5DTM8 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC25,87■■□□□ 1,73
Rnf20Q5DTM8 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC25,87■■□□□ 1,73
Rnf20Q5DTM8 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC25,86■■□□□ 1,73
Rnf20Q5DTM8 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC25,86■■□□□ 1,73
Rnf20Q5DTM8 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC25,86■■□□□ 1,73
Rnf20Q5DTM8 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC25,86■■□□□ 1,73
Rnf20Q5DTM8 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC25,86■■□□□ 1,73
Rnf20Q5DTM8 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC25,86■■□□□ 1,73
Rnf20Q5DTM8 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC25,86■■□□□ 1,73
Rnf20Q5DTM8 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC25,86■■□□□ 1,73
Rnf20Q5DTM8 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC25,86■■□□□ 1,73
Rnf20Q5DTM8 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC25,85■■□□□ 1,73
Rnf20Q5DTM8 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC25,85■■□□□ 1,73
Rnf20Q5DTM8 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC25,85■■□□□ 1,73
Rnf20Q5DTM8 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC25,85■■□□□ 1,73
Rnf20Q5DTM8 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC25,85■■□□□ 1,73
Rnf20Q5DTM8 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC25,85■■□□□ 1,73
Rnf20Q5DTM8 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC25,84■■□□□ 1,73
Rnf20Q5DTM8 Gm17641-201ENSMUST00000166328 2350 ntBASIC25,84■■□□□ 1,73
Rnf20Q5DTM8 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC25,83■■□□□ 1,73
Rnf20Q5DTM8 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC25,83■■□□□ 1,73
Rnf20Q5DTM8 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC25,83■■□□□ 1,72
Rnf20Q5DTM8 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC25,82■■□□□ 1,72
Rnf20Q5DTM8 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC25,82■■□□□ 1,72
Rnf20Q5DTM8 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC25,82■■□□□ 1,72
Rnf20Q5DTM8 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC25,82■■□□□ 1,72
Rnf20Q5DTM8 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC25,82■■□□□ 1,72
Rnf20Q5DTM8 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC25,82■■□□□ 1,72
Rnf20Q5DTM8 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC25,81■■□□□ 1,72
Rnf20Q5DTM8 Gm7332-201ENSMUST00000118351 454 ntBASIC25,81■■□□□ 1,72
Rnf20Q5DTM8 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC25,81■■□□□ 1,72
Rnf20Q5DTM8 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC25,81■■□□□ 1,72
Rnf20Q5DTM8 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC25,81■■□□□ 1,72
Rnf20Q5DTM8 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC25,81■■□□□ 1,72
Rnf20Q5DTM8 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC25,81■■□□□ 1,72
Rnf20Q5DTM8 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC25,8■■□□□ 1,72
Rnf20Q5DTM8 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC25,8■■□□□ 1,72
Rnf20Q5DTM8 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC25,8■■□□□ 1,72
Rnf20Q5DTM8 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC25,8■■□□□ 1,72
Rnf20Q5DTM8 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC25,8■■□□□ 1,72
Rnf20Q5DTM8 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC25,8■■□□□ 1,72
Rnf20Q5DTM8 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC25,8■■□□□ 1,72
Rnf20Q5DTM8 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC25,79■■□□□ 1,72
Rnf20Q5DTM8 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC25,79■■□□□ 1,72
Rnf20Q5DTM8 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC25,79■■□□□ 1,72
Rnf20Q5DTM8 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC25,79■■□□□ 1,72
Rnf20Q5DTM8 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC25,79■■□□□ 1,72
Rnf20Q5DTM8 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC25,79■■□□□ 1,72
Rnf20Q5DTM8 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC25,78■■□□□ 1,72
Rnf20Q5DTM8 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC25,78■■□□□ 1,72
Rnf20Q5DTM8 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC25,78■■□□□ 1,72
Rnf20Q5DTM8 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC25,77■■□□□ 1,72
Rnf20Q5DTM8 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC25,77■■□□□ 1,72
Rnf20Q5DTM8 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC25,77■■□□□ 1,72
Rnf20Q5DTM8 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC25,77■■□□□ 1,72
Rnf20Q5DTM8 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC25,77■■□□□ 1,72
Rnf20Q5DTM8 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC25,77■■□□□ 1,72
Rnf20Q5DTM8 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC25,77■■□□□ 1,72
Rnf20Q5DTM8 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC25,76■■□□□ 1,72
Rnf20Q5DTM8 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC25,76■■□□□ 1,71
Rnf20Q5DTM8 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC25,76■■□□□ 1,71
Rnf20Q5DTM8 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC25,76■■□□□ 1,71
Rnf20Q5DTM8 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC25,76■■□□□ 1,71
Rnf20Q5DTM8 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC25,76■■□□□ 1,71
Rnf20Q5DTM8 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC25,75■■□□□ 1,71
Rnf20Q5DTM8 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC25,75■■□□□ 1,71
Rnf20Q5DTM8 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC25,75■■□□□ 1,71
Rnf20Q5DTM8 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC25,75■■□□□ 1,71
Rnf20Q5DTM8 Gm12366-201ENSMUST00000121722 873 ntBASIC25,75■■□□□ 1,71
Rnf20Q5DTM8 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC25,75■■□□□ 1,71
Rnf20Q5DTM8 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC25,75■■□□□ 1,71
Rnf20Q5DTM8 Gm5786-201ENSMUST00000085368 882 ntBASIC25,75■■□□□ 1,71
Rnf20Q5DTM8 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC25,74■■□□□ 1,71
Rnf20Q5DTM8 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC25,74■■□□□ 1,71
Rnf20Q5DTM8 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC25,74■■□□□ 1,71
Rnf20Q5DTM8 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC25,74■■□□□ 1,71
Rnf20Q5DTM8 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC25,73■■□□□ 1,71
Rnf20Q5DTM8 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC25,73■■□□□ 1,71
Rnf20Q5DTM8 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC25,73■■□□□ 1,71
Retrieved 100 of 76,532 protein–RNA pairs in 15,6 ms