Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Urb1Q571H0 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Urb1Q571H0 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Urb1Q571H0 Gm22238-201ENSMUST00000175222 88 ntBASIC20.07■□□□□ 0.8
Urb1Q571H0 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Urb1Q571H0 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
Urb1Q571H0 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Urb1Q571H0 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
Urb1Q571H0 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Urb1Q571H0 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
Urb1Q571H0 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Urb1Q571H0 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.06■□□□□ 0.8
Urb1Q571H0 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.06■□□□□ 0.8
Urb1Q571H0 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Urb1Q571H0 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Urb1Q571H0 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Urb1Q571H0 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Urb1Q571H0 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Urb1Q571H0 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Urb1Q571H0 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.04■□□□□ 0.8
Urb1Q571H0 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Urb1Q571H0 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Urb1Q571H0 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Urb1Q571H0 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Urb1Q571H0 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.02■□□□□ 0.8
Urb1Q571H0 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Urb1Q571H0 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Urb1Q571H0 Gm27454-201ENSMUST00000185090 204 ntBASIC20.01■□□□□ 0.79
Urb1Q571H0 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.01■□□□□ 0.79
Urb1Q571H0 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Urb1Q571H0 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Urb1Q571H0 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Urb1Q571H0 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.01■□□□□ 0.79
Urb1Q571H0 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20■□□□□ 0.79
Urb1Q571H0 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Urb1Q571H0 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20■□□□□ 0.79
Urb1Q571H0 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Urb1Q571H0 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Urb1Q571H0 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Urb1Q571H0 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Urb1Q571H0 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Urb1Q571H0 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Urb1Q571H0 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20■□□□□ 0.79
Urb1Q571H0 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Urb1Q571H0 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Urb1Q571H0 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Urb1Q571H0 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Urb1Q571H0 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.99■□□□□ 0.79
Urb1Q571H0 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Urb1Q571H0 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Urb1Q571H0 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Urb1Q571H0 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Urb1Q571H0 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Urb1Q571H0 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Urb1Q571H0 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Urb1Q571H0 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.97■□□□□ 0.79
Urb1Q571H0 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.97■□□□□ 0.79
Urb1Q571H0 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Urb1Q571H0 Gm45417-201ENSMUST00000209533 758 ntBASIC19.97■□□□□ 0.79
Urb1Q571H0 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.97■□□□□ 0.79
Urb1Q571H0 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Urb1Q571H0 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Urb1Q571H0 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Urb1Q571H0 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.96■□□□□ 0.79
Urb1Q571H0 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.96■□□□□ 0.79
Urb1Q571H0 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Urb1Q571H0 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.96■□□□□ 0.79
Urb1Q571H0 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.96■□□□□ 0.79
Urb1Q571H0 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Urb1Q571H0 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.95■□□□□ 0.78
Urb1Q571H0 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
Urb1Q571H0 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Urb1Q571H0 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Urb1Q571H0 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Urb1Q571H0 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Urb1Q571H0 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.95■□□□□ 0.78
Urb1Q571H0 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.95■□□□□ 0.78
Urb1Q571H0 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Urb1Q571H0 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.95■□□□□ 0.78
Urb1Q571H0 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Urb1Q571H0 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Urb1Q571H0 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Urb1Q571H0 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Urb1Q571H0 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Urb1Q571H0 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Urb1Q571H0 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Urb1Q571H0 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.93■□□□□ 0.78
Urb1Q571H0 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.93■□□□□ 0.78
Urb1Q571H0 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Urb1Q571H0 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
Urb1Q571H0 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Urb1Q571H0 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.93■□□□□ 0.78
Urb1Q571H0 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Urb1Q571H0 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Urb1Q571H0 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.92■□□□□ 0.78
Urb1Q571H0 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Urb1Q571H0 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Urb1Q571H0 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.91■□□□□ 0.78
Urb1Q571H0 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Urb1Q571H0 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms