Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cks1brtQ3UNC9 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cks1brtQ3UNC9 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cks1brtQ3UNC9 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cks1brtQ3UNC9 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cks1brtQ3UNC9 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cks1brtQ3UNC9 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Cks1brtQ3UNC9 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Cks1brtQ3UNC9 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cks1brtQ3UNC9 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cks1brtQ3UNC9 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cks1brtQ3UNC9 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cks1brtQ3UNC9 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cks1brtQ3UNC9 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cks1brtQ3UNC9 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cks1brtQ3UNC9 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cks1brtQ3UNC9 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cks1brtQ3UNC9 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
Cks1brtQ3UNC9 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Cks1brtQ3UNC9 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Cks1brtQ3UNC9 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Cks1brtQ3UNC9 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cks1brtQ3UNC9 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cks1brtQ3UNC9 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cks1brtQ3UNC9 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Cks1brtQ3UNC9 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cks1brtQ3UNC9 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cks1brtQ3UNC9 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cks1brtQ3UNC9 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cks1brtQ3UNC9 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cks1brtQ3UNC9 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cks1brtQ3UNC9 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC15.75■□□□□ 0.11
Cks1brtQ3UNC9 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Cks1brtQ3UNC9 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Cks1brtQ3UNC9 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cks1brtQ3UNC9 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cks1brtQ3UNC9 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC15.75■□□□□ 0.11
Cks1brtQ3UNC9 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Cks1brtQ3UNC9 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC15.74■□□□□ 0.11
Cks1brtQ3UNC9 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cks1brtQ3UNC9 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Cks1brtQ3UNC9 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cks1brtQ3UNC9 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
Cks1brtQ3UNC9 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cks1brtQ3UNC9 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cks1brtQ3UNC9 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cks1brtQ3UNC9 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cks1brtQ3UNC9 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cks1brtQ3UNC9 Dapk1-207ENSMUST00000226059 5009 ntBASIC15.74■□□□□ 0.11
Cks1brtQ3UNC9 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cks1brtQ3UNC9 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cks1brtQ3UNC9 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cks1brtQ3UNC9 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Cks1brtQ3UNC9 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cks1brtQ3UNC9 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cks1brtQ3UNC9 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cks1brtQ3UNC9 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cks1brtQ3UNC9 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Cks1brtQ3UNC9 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cks1brtQ3UNC9 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cks1brtQ3UNC9 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Cks1brtQ3UNC9 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC15.72■□□□□ 0.11
Cks1brtQ3UNC9 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Cks1brtQ3UNC9 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Cks1brtQ3UNC9 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cks1brtQ3UNC9 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Cks1brtQ3UNC9 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cks1brtQ3UNC9 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cks1brtQ3UNC9 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cks1brtQ3UNC9 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cks1brtQ3UNC9 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
Cks1brtQ3UNC9 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cks1brtQ3UNC9 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cks1brtQ3UNC9 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC15.7■□□□□ 0.1
Cks1brtQ3UNC9 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cks1brtQ3UNC9 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cks1brtQ3UNC9 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cks1brtQ3UNC9 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cks1brtQ3UNC9 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cks1brtQ3UNC9 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cks1brtQ3UNC9 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Cks1brtQ3UNC9 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cks1brtQ3UNC9 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cks1brtQ3UNC9 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC15.69■□□□□ 0.1
Cks1brtQ3UNC9 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cks1brtQ3UNC9 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cks1brtQ3UNC9 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cks1brtQ3UNC9 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cks1brtQ3UNC9 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cks1brtQ3UNC9 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cks1brtQ3UNC9 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cks1brtQ3UNC9 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cks1brtQ3UNC9 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Cks1brtQ3UNC9 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cks1brtQ3UNC9 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Cks1brtQ3UNC9 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cks1brtQ3UNC9 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cks1brtQ3UNC9 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cks1brtQ3UNC9 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cks1brtQ3UNC9 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 473.3 ms