Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.89■□□□□ 0.93
Ptchd3Q0EEE2 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ptchd3Q0EEE2 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.88■□□□□ 0.93
Ptchd3Q0EEE2 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Ptchd3Q0EEE2 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ptchd3Q0EEE2 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ptchd3Q0EEE2 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ptchd3Q0EEE2 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ptchd3Q0EEE2 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ptchd3Q0EEE2 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ptchd3Q0EEE2 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ptchd3Q0EEE2 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.86■□□□□ 0.93
Ptchd3Q0EEE2 Mir3960-201ENSMUST00000198213 73 ntBASIC20.86■□□□□ 0.93
Ptchd3Q0EEE2 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ptchd3Q0EEE2 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ptchd3Q0EEE2 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ptchd3Q0EEE2 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ptchd3Q0EEE2 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ptchd3Q0EEE2 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.84■□□□□ 0.93
Ptchd3Q0EEE2 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ptchd3Q0EEE2 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ptchd3Q0EEE2 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ptchd3Q0EEE2 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ptchd3Q0EEE2 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.84■□□□□ 0.93
Ptchd3Q0EEE2 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Ptchd3Q0EEE2 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Ptchd3Q0EEE2 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ptchd3Q0EEE2 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ptchd3Q0EEE2 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ptchd3Q0EEE2 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.82■□□□□ 0.92
Ptchd3Q0EEE2 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ptchd3Q0EEE2 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ptchd3Q0EEE2 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ptchd3Q0EEE2 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ptchd3Q0EEE2 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ptchd3Q0EEE2 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ptchd3Q0EEE2 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
Ptchd3Q0EEE2 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ptchd3Q0EEE2 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ptchd3Q0EEE2 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ptchd3Q0EEE2 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Ptchd3Q0EEE2 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ptchd3Q0EEE2 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ptchd3Q0EEE2 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.81■□□□□ 0.92
Ptchd3Q0EEE2 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ptchd3Q0EEE2 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Ptchd3Q0EEE2 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Ptchd3Q0EEE2 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
Ptchd3Q0EEE2 Gm45364-201ENSMUST00000210883 159 ntBASIC20.8■□□□□ 0.92
Ptchd3Q0EEE2 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.8■□□□□ 0.92
Ptchd3Q0EEE2 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ptchd3Q0EEE2 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ptchd3Q0EEE2 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ptchd3Q0EEE2 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Ptchd3Q0EEE2 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ptchd3Q0EEE2 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ptchd3Q0EEE2 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Ptchd3Q0EEE2 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ptchd3Q0EEE2 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ptchd3Q0EEE2 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ptchd3Q0EEE2 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ptchd3Q0EEE2 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ptchd3Q0EEE2 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.78■□□□□ 0.92
Ptchd3Q0EEE2 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ptchd3Q0EEE2 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Ptchd3Q0EEE2 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.78■□□□□ 0.92
Ptchd3Q0EEE2 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ptchd3Q0EEE2 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ptchd3Q0EEE2 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Ptchd3Q0EEE2 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Ptchd3Q0EEE2 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ptchd3Q0EEE2 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ptchd3Q0EEE2 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.77■□□□□ 0.91
Ptchd3Q0EEE2 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Ptchd3Q0EEE2 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Ptchd3Q0EEE2 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
Ptchd3Q0EEE2 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Ptchd3Q0EEE2 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ptchd3Q0EEE2 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.76■□□□□ 0.91
Ptchd3Q0EEE2 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.76■□□□□ 0.91
Ptchd3Q0EEE2 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ptchd3Q0EEE2 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.76■□□□□ 0.91
Ptchd3Q0EEE2 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ptchd3Q0EEE2 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ptchd3Q0EEE2 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ptchd3Q0EEE2 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ptchd3Q0EEE2 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ptchd3Q0EEE2 Gm9812-201ENSMUST00000061934 968 ntBASIC20.75■□□□□ 0.91
Ptchd3Q0EEE2 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ptchd3Q0EEE2 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ptchd3Q0EEE2 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ptchd3Q0EEE2 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ptchd3Q0EEE2 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.74■□□□□ 0.91
Ptchd3Q0EEE2 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ptchd3Q0EEE2 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Ptchd3Q0EEE2 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Ptchd3Q0EEE2 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ptchd3Q0EEE2 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.74■□□□□ 0.91
Ptchd3Q0EEE2 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ptchd3Q0EEE2 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms