Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Tff1Q08423 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tff1Q08423 Mir3960-201ENSMUST00000198213 73 ntBASIC17.94■□□□□ 0.46
Tff1Q08423 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tff1Q08423 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Tff1Q08423 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tff1Q08423 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC17.94■□□□□ 0.46
Tff1Q08423 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tff1Q08423 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC17.93■□□□□ 0.46
Tff1Q08423 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tff1Q08423 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC17.93■□□□□ 0.46
Tff1Q08423 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC17.93■□□□□ 0.46
Tff1Q08423 Gm45364-201ENSMUST00000210883 159 ntBASIC17.93■□□□□ 0.46
Tff1Q08423 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Tff1Q08423 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tff1Q08423 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tff1Q08423 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tff1Q08423 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Tff1Q08423 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tff1Q08423 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC17.92■□□□□ 0.46
Tff1Q08423 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tff1Q08423 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Tff1Q08423 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
Tff1Q08423 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Tff1Q08423 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tff1Q08423 Pkd1-207ENSMUST00000228550 1050 ntBASIC17.91■□□□□ 0.46
Tff1Q08423 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.91■□□□□ 0.46
Tff1Q08423 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tff1Q08423 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tff1Q08423 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC17.9■□□□□ 0.46
Tff1Q08423 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
Tff1Q08423 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC17.9■□□□□ 0.46
Tff1Q08423 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Tff1Q08423 AC122317.2-201ENSMUST00000218708 1248 ntBASIC17.9■□□□□ 0.46
Tff1Q08423 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Tff1Q08423 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Tff1Q08423 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tff1Q08423 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Tff1Q08423 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Tff1Q08423 Gm9812-201ENSMUST00000061934 968 ntBASIC17.89■□□□□ 0.45
Tff1Q08423 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Tff1Q08423 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tff1Q08423 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tff1Q08423 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.88■□□□□ 0.45
Tff1Q08423 Gm26766-202ENSMUST00000227544 2347 ntBASIC17.88■□□□□ 0.45
Tff1Q08423 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tff1Q08423 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Tff1Q08423 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC17.88■□□□□ 0.45
Tff1Q08423 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tff1Q08423 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Tff1Q08423 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
Tff1Q08423 Gm7332-201ENSMUST00000118351 454 ntBASIC17.87■□□□□ 0.45
Tff1Q08423 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC17.87■□□□□ 0.45
Tff1Q08423 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tff1Q08423 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tff1Q08423 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.87■□□□□ 0.45
Tff1Q08423 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.87■□□□□ 0.45
Tff1Q08423 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tff1Q08423 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tff1Q08423 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tff1Q08423 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tff1Q08423 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC17.86■□□□□ 0.45
Tff1Q08423 Gm12818-201ENSMUST00000117562 1349 ntBASIC17.86■□□□□ 0.45
Tff1Q08423 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tff1Q08423 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tff1Q08423 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tff1Q08423 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Tff1Q08423 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC17.85■□□□□ 0.45
Tff1Q08423 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tff1Q08423 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tff1Q08423 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tff1Q08423 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tff1Q08423 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.85■□□□□ 0.45
Tff1Q08423 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
Tff1Q08423 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tff1Q08423 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tff1Q08423 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tff1Q08423 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tff1Q08423 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Tff1Q08423 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Tff1Q08423 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tff1Q08423 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Tff1Q08423 AC153911.1-201ENSMUST00000220378 758 ntBASIC17.84■□□□□ 0.45
Tff1Q08423 AC154454.1-201ENSMUST00000225253 216 ntBASIC17.84■□□□□ 0.45
Tff1Q08423 Terc-201ENSMUST00000082862 423 ntBASIC17.84■□□□□ 0.45
Tff1Q08423 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tff1Q08423 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Tff1Q08423 Gm27502-201ENSMUST00000183495 199 ntBASIC17.83■□□□□ 0.44
Tff1Q08423 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC17.83■□□□□ 0.44
Tff1Q08423 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tff1Q08423 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC17.83■□□□□ 0.44
Tff1Q08423 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tff1Q08423 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tff1Q08423 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.83■□□□□ 0.44
Tff1Q08423 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tff1Q08423 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tff1Q08423 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Tff1Q08423 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC17.82■□□□□ 0.44
Tff1Q08423 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tff1Q08423 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms