Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col10a1Q05306 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Col10a1Q05306 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col10a1Q05306 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col10a1Q05306 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Col10a1Q05306 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.02■□□□□ 0.8
Col10a1Q05306 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col10a1Q05306 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col10a1Q05306 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Col10a1Q05306 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
Col10a1Q05306 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Col10a1Q05306 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col10a1Q05306 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
Col10a1Q05306 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.01■□□□□ 0.79
Col10a1Q05306 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Col10a1Q05306 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col10a1Q05306 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.01■□□□□ 0.79
Col10a1Q05306 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Col10a1Q05306 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Col10a1Q05306 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col10a1Q05306 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20■□□□□ 0.79
Col10a1Q05306 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20■□□□□ 0.79
Col10a1Q05306 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Col10a1Q05306 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col10a1Q05306 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col10a1Q05306 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Col10a1Q05306 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Col10a1Q05306 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col10a1Q05306 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.98■□□□□ 0.79
Col10a1Q05306 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Col10a1Q05306 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col10a1Q05306 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Col10a1Q05306 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col10a1Q05306 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.98■□□□□ 0.79
Col10a1Q05306 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col10a1Q05306 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col10a1Q05306 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col10a1Q05306 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.97■□□□□ 0.79
Col10a1Q05306 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col10a1Q05306 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.97■□□□□ 0.79
Col10a1Q05306 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col10a1Q05306 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Col10a1Q05306 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col10a1Q05306 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col10a1Q05306 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Col10a1Q05306 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col10a1Q05306 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Col10a1Q05306 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.96■□□□□ 0.79
Col10a1Q05306 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col10a1Q05306 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col10a1Q05306 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col10a1Q05306 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col10a1Q05306 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Col10a1Q05306 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col10a1Q05306 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Col10a1Q05306 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Col10a1Q05306 Gm22567-201ENSMUST00000175542 342 ntBASIC19.94■□□□□ 0.78
Col10a1Q05306 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col10a1Q05306 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Col10a1Q05306 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Col10a1Q05306 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col10a1Q05306 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col10a1Q05306 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col10a1Q05306 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col10a1Q05306 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Col10a1Q05306 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Col10a1Q05306 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col10a1Q05306 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col10a1Q05306 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col10a1Q05306 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col10a1Q05306 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col10a1Q05306 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col10a1Q05306 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col10a1Q05306 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col10a1Q05306 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Col10a1Q05306 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col10a1Q05306 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.92■□□□□ 0.78
Col10a1Q05306 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Col10a1Q05306 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col10a1Q05306 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col10a1Q05306 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col10a1Q05306 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.92■□□□□ 0.78
Col10a1Q05306 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Col10a1Q05306 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Col10a1Q05306 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col10a1Q05306 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Col10a1Q05306 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Col10a1Q05306 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Col10a1Q05306 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col10a1Q05306 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Col10a1Q05306 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col10a1Q05306 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col10a1Q05306 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.9■□□□□ 0.78
Col10a1Q05306 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
Col10a1Q05306 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Col10a1Q05306 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.89■□□□□ 0.77
Col10a1Q05306 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col10a1Q05306 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col10a1Q05306 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col10a1Q05306 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 148.4 ms