Protein–RNA interactions for Protein: P98083

Shc1, SHC-transforming protein 1, mousemouse

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shc1P98083 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Shc1P98083 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Shc1P98083 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
Shc1P98083 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.55■□□□□ 0.72
Shc1P98083 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.55■□□□□ 0.72
Shc1P98083 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Shc1P98083 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Shc1P98083 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.54■□□□□ 0.72
Shc1P98083 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Shc1P98083 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.54■□□□□ 0.72
Shc1P98083 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Shc1P98083 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Shc1P98083 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Shc1P98083 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Shc1P98083 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Shc1P98083 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Shc1P98083 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Shc1P98083 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Shc1P98083 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Shc1P98083 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
Shc1P98083 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
Shc1P98083 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Shc1P98083 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Shc1P98083 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
Shc1P98083 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Shc1P98083 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Shc1P98083 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Shc1P98083 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
Shc1P98083 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Shc1P98083 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.51■□□□□ 0.71
Shc1P98083 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Shc1P98083 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Shc1P98083 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Shc1P98083 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Shc1P98083 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Shc1P98083 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.5■□□□□ 0.71
Shc1P98083 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Shc1P98083 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Shc1P98083 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
Shc1P98083 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Shc1P98083 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Shc1P98083 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Shc1P98083 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Shc1P98083 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Shc1P98083 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Shc1P98083 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
Shc1P98083 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.49■□□□□ 0.71
Shc1P98083 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Shc1P98083 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Shc1P98083 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Shc1P98083 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Shc1P98083 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.48■□□□□ 0.71
Shc1P98083 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Shc1P98083 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Shc1P98083 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.47■□□□□ 0.71
Shc1P98083 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Shc1P98083 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Shc1P98083 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Shc1P98083 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Shc1P98083 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Shc1P98083 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Shc1P98083 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.46■□□□□ 0.71
Shc1P98083 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Shc1P98083 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.46■□□□□ 0.71
Shc1P98083 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.46■□□□□ 0.71
Shc1P98083 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.46■□□□□ 0.71
Shc1P98083 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Shc1P98083 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.46■□□□□ 0.71
Shc1P98083 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Shc1P98083 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Shc1P98083 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Shc1P98083 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Shc1P98083 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Shc1P98083 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Shc1P98083 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Shc1P98083 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Shc1P98083 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Shc1P98083 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Shc1P98083 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Shc1P98083 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Shc1P98083 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Shc1P98083 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Shc1P98083 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Shc1P98083 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Shc1P98083 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Shc1P98083 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.44■□□□□ 0.7
Shc1P98083 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Shc1P98083 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Shc1P98083 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shc1P98083 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shc1P98083 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shc1P98083 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Shc1P98083 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shc1P98083 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shc1P98083 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shc1P98083 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shc1P98083 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shc1P98083 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shc1P98083 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Shc1P98083 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms