Protein–RNA interactions for Protein: P70658

Cxcr4, C-X-C chemokine receptor type 4, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr4P70658 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cxcr4P70658 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cxcr4P70658 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cxcr4P70658 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cxcr4P70658 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cxcr4P70658 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cxcr4P70658 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.34■□□□□ 0.85
Cxcr4P70658 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cxcr4P70658 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cxcr4P70658 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cxcr4P70658 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cxcr4P70658 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cxcr4P70658 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cxcr4P70658 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.85
Cxcr4P70658 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Cxcr4P70658 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cxcr4P70658 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cxcr4P70658 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cxcr4P70658 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Cxcr4P70658 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cxcr4P70658 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cxcr4P70658 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.32■□□□□ 0.84
Cxcr4P70658 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cxcr4P70658 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cxcr4P70658 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cxcr4P70658 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.31■□□□□ 0.84
Cxcr4P70658 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cxcr4P70658 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cxcr4P70658 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.31■□□□□ 0.84
Cxcr4P70658 Gm12366-201ENSMUST00000121722 873 ntBASIC20.31■□□□□ 0.84
Cxcr4P70658 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.31■□□□□ 0.84
Cxcr4P70658 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.31■□□□□ 0.84
Cxcr4P70658 Gm5786-201ENSMUST00000085368 882 ntBASIC20.31■□□□□ 0.84
Cxcr4P70658 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cxcr4P70658 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cxcr4P70658 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cxcr4P70658 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cxcr4P70658 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.3■□□□□ 0.84
Cxcr4P70658 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cxcr4P70658 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cxcr4P70658 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.3■□□□□ 0.84
Cxcr4P70658 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Cxcr4P70658 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Cxcr4P70658 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.3■□□□□ 0.84
Cxcr4P70658 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cxcr4P70658 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.29■□□□□ 0.84
Cxcr4P70658 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.29■□□□□ 0.84
Cxcr4P70658 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cxcr4P70658 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cxcr4P70658 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cxcr4P70658 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cxcr4P70658 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cxcr4P70658 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.29■□□□□ 0.84
Cxcr4P70658 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cxcr4P70658 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cxcr4P70658 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.28■□□□□ 0.84
Cxcr4P70658 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cxcr4P70658 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Cxcr4P70658 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Cxcr4P70658 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cxcr4P70658 Gm27502-201ENSMUST00000183495 199 ntBASIC20.27■□□□□ 0.84
Cxcr4P70658 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cxcr4P70658 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cxcr4P70658 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cxcr4P70658 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cxcr4P70658 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cxcr4P70658 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cxcr4P70658 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cxcr4P70658 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.26■□□□□ 0.83
Cxcr4P70658 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.26■□□□□ 0.83
Cxcr4P70658 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.26■□□□□ 0.83
Cxcr4P70658 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cxcr4P70658 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.26■□□□□ 0.83
Cxcr4P70658 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cxcr4P70658 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.25■□□□□ 0.83
Cxcr4P70658 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.25■□□□□ 0.83
Cxcr4P70658 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cxcr4P70658 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.25■□□□□ 0.83
Cxcr4P70658 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Cxcr4P70658 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cxcr4P70658 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cxcr4P70658 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cxcr4P70658 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cxcr4P70658 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cxcr4P70658 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Cxcr4P70658 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cxcr4P70658 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cxcr4P70658 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Cxcr4P70658 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cxcr4P70658 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cxcr4P70658 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cxcr4P70658 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cxcr4P70658 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cxcr4P70658 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.22■□□□□ 0.83
Cxcr4P70658 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cxcr4P70658 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cxcr4P70658 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cxcr4P70658 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cxcr4P70658 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Cxcr4P70658 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 89.9 ms