Protein–RNA interactions for Protein: P70398

Usp9x, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, mousemouse

Known RBP Predictions only

Length 2,559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp9xP70398 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.46■□□□□ 0.55
Usp9xP70398 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Usp9xP70398 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.45■□□□□ 0.54
Usp9xP70398 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Usp9xP70398 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Usp9xP70398 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.45■□□□□ 0.54
Usp9xP70398 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.45■□□□□ 0.54
Usp9xP70398 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Usp9xP70398 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Usp9xP70398 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Usp9xP70398 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Usp9xP70398 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC18.44■□□□□ 0.54
Usp9xP70398 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Usp9xP70398 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Usp9xP70398 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Usp9xP70398 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.43■□□□□ 0.54
Usp9xP70398 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Usp9xP70398 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Usp9xP70398 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Usp9xP70398 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Usp9xP70398 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Usp9xP70398 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.42■□□□□ 0.54
Usp9xP70398 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp9xP70398 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp9xP70398 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp9xP70398 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Usp9xP70398 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp9xP70398 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Usp9xP70398 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp9xP70398 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp9xP70398 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Usp9xP70398 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp9xP70398 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp9xP70398 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Usp9xP70398 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp9xP70398 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.4■□□□□ 0.54
Usp9xP70398 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.39■□□□□ 0.54
Usp9xP70398 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp9xP70398 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp9xP70398 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Usp9xP70398 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp9xP70398 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Usp9xP70398 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp9xP70398 Gm6139-201ENSMUST00000079261 882 ntBASIC18.38■□□□□ 0.53
Usp9xP70398 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Usp9xP70398 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp9xP70398 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Usp9xP70398 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.38■□□□□ 0.53
Usp9xP70398 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Usp9xP70398 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp9xP70398 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.38■□□□□ 0.53
Usp9xP70398 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.37■□□□□ 0.53
Usp9xP70398 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Usp9xP70398 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.37■□□□□ 0.53
Usp9xP70398 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp9xP70398 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp9xP70398 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
Usp9xP70398 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp9xP70398 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp9xP70398 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp9xP70398 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.36■□□□□ 0.53
Usp9xP70398 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Usp9xP70398 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp9xP70398 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.35■□□□□ 0.53
Usp9xP70398 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp9xP70398 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp9xP70398 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Usp9xP70398 Gm10399-202ENSMUST00000202768 748 ntBASIC18.35■□□□□ 0.53
Usp9xP70398 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.35■□□□□ 0.53
Usp9xP70398 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Usp9xP70398 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp9xP70398 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp9xP70398 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp9xP70398 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.35■□□□□ 0.53
Usp9xP70398 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.35■□□□□ 0.53
Usp9xP70398 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp9xP70398 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC18.34■□□□□ 0.53
Usp9xP70398 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Usp9xP70398 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Usp9xP70398 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Usp9xP70398 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp9xP70398 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Usp9xP70398 Amer2-203ENSMUST00000225247 2662 ntBASIC18.34■□□□□ 0.53
Usp9xP70398 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Usp9xP70398 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Usp9xP70398 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Usp9xP70398 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.33■□□□□ 0.52
Usp9xP70398 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
Usp9xP70398 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.33■□□□□ 0.52
Usp9xP70398 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.33■□□□□ 0.52
Usp9xP70398 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.33■□□□□ 0.52
Usp9xP70398 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.33■□□□□ 0.52
Usp9xP70398 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.32■□□□□ 0.52
Usp9xP70398 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp9xP70398 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Usp9xP70398 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.32■□□□□ 0.52
Usp9xP70398 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp9xP70398 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp9xP70398 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp9xP70398 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms