Protein–RNA interactions for Protein: P63054

Pcp4, Calmodulin regulator protein PCP4, mousemouse

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcp4P63054 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC14.93□□□□□ -0.02
Pcp4P63054 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
Pcp4P63054 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcp4P63054 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcp4P63054 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcp4P63054 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcp4P63054 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcp4P63054 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcp4P63054 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Pcp4P63054 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Pcp4P63054 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Pcp4P63054 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pcp4P63054 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcp4P63054 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcp4P63054 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcp4P63054 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Pcp4P63054 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
Pcp4P63054 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcp4P63054 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
Pcp4P63054 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcp4P63054 Gm5784-201ENSMUST00000179344 2478 ntBASIC14.91□□□□□ -0.02
Pcp4P63054 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Pcp4P63054 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcp4P63054 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcp4P63054 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcp4P63054 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcp4P63054 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcp4P63054 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcp4P63054 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcp4P63054 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcp4P63054 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcp4P63054 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcp4P63054 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC14.9□□□□□ -0.02
Pcp4P63054 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcp4P63054 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC14.89□□□□□ -0.03
Pcp4P63054 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Pcp4P63054 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcp4P63054 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Pcp4P63054 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcp4P63054 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcp4P63054 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Pcp4P63054 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcp4P63054 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcp4P63054 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcp4P63054 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcp4P63054 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcp4P63054 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcp4P63054 Grk6-206ENSMUST00000224995 2971 ntBASIC14.87□□□□□ -0.03
Pcp4P63054 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcp4P63054 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcp4P63054 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcp4P63054 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcp4P63054 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Pcp4P63054 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcp4P63054 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcp4P63054 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcp4P63054 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcp4P63054 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcp4P63054 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcp4P63054 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Pcp4P63054 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcp4P63054 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcp4P63054 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcp4P63054 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcp4P63054 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pcp4P63054 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
Pcp4P63054 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC14.86□□□□□ -0.03
Pcp4P63054 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Pcp4P63054 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcp4P63054 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcp4P63054 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcp4P63054 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcp4P63054 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcp4P63054 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcp4P63054 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcp4P63054 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcp4P63054 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcp4P63054 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcp4P63054 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcp4P63054 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcp4P63054 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcp4P63054 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcp4P63054 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcp4P63054 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcp4P63054 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcp4P63054 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcp4P63054 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcp4P63054 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pcp4P63054 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcp4P63054 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcp4P63054 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcp4P63054 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC14.83□□□□□ -0.04
Pcp4P63054 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pcp4P63054 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcp4P63054 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcp4P63054 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcp4P63054 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcp4P63054 Gm19439-201ENSMUST00000198195 2273 ntBASIC14.82□□□□□ -0.04
Pcp4P63054 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcp4P63054 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms