Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lsm6P62313 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lsm6P62313 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lsm6P62313 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Lsm6P62313 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lsm6P62313 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Lsm6P62313 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lsm6P62313 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lsm6P62313 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Lsm6P62313 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Lsm6P62313 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Lsm6P62313 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.05■□□□□ 0.64
Lsm6P62313 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.05■□□□□ 0.64
Lsm6P62313 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lsm6P62313 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.05■□□□□ 0.64
Lsm6P62313 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Lsm6P62313 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lsm6P62313 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lsm6P62313 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Lsm6P62313 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lsm6P62313 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lsm6P62313 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Lsm6P62313 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lsm6P62313 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Lsm6P62313 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lsm6P62313 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lsm6P62313 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lsm6P62313 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Lsm6P62313 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Lsm6P62313 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.03■□□□□ 0.64
Lsm6P62313 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.03■□□□□ 0.64
Lsm6P62313 Mir6538-201ENSMUST00000183713 110 ntBASIC19.03■□□□□ 0.64
Lsm6P62313 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lsm6P62313 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lsm6P62313 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lsm6P62313 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.02■□□□□ 0.64
Lsm6P62313 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lsm6P62313 Gm14523-201ENSMUST00000117260 558 ntBASIC19.02■□□□□ 0.64
Lsm6P62313 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Lsm6P62313 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lsm6P62313 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lsm6P62313 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.01■□□□□ 0.63
Lsm6P62313 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.01■□□□□ 0.63
Lsm6P62313 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lsm6P62313 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
Lsm6P62313 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.01■□□□□ 0.63
Lsm6P62313 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lsm6P62313 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lsm6P62313 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lsm6P62313 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lsm6P62313 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lsm6P62313 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19■□□□□ 0.63
Lsm6P62313 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19■□□□□ 0.63
Lsm6P62313 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
Lsm6P62313 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19■□□□□ 0.63
Lsm6P62313 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.99■□□□□ 0.63
Lsm6P62313 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.99■□□□□ 0.63
Lsm6P62313 Gm27502-201ENSMUST00000183495 199 ntBASIC18.99■□□□□ 0.63
Lsm6P62313 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lsm6P62313 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Lsm6P62313 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Lsm6P62313 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lsm6P62313 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Lsm6P62313 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lsm6P62313 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lsm6P62313 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lsm6P62313 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Lsm6P62313 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Lsm6P62313 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Lsm6P62313 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lsm6P62313 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Lsm6P62313 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lsm6P62313 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Lsm6P62313 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lsm6P62313 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lsm6P62313 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lsm6P62313 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lsm6P62313 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lsm6P62313 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lsm6P62313 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.97■□□□□ 0.63
Lsm6P62313 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC18.97■□□□□ 0.63
Lsm6P62313 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lsm6P62313 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lsm6P62313 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lsm6P62313 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lsm6P62313 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lsm6P62313 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lsm6P62313 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Lsm6P62313 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lsm6P62313 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.96■□□□□ 0.63
Lsm6P62313 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lsm6P62313 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lsm6P62313 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.96■□□□□ 0.63
Lsm6P62313 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Lsm6P62313 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lsm6P62313 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Lsm6P62313 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lsm6P62313 Gm7332-201ENSMUST00000118351 454 ntBASIC18.95■□□□□ 0.62
Lsm6P62313 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lsm6P62313 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms