Protein–RNA interactions for Protein: P52927

Hmga2, High mobility group protein HMGI-C, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga2P52927 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.57■□□□□ 0.56
Hmga2P52927 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hmga2P52927 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hmga2P52927 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Hmga2P52927 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hmga2P52927 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hmga2P52927 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hmga2P52927 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Hmga2P52927 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hmga2P52927 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hmga2P52927 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.54■□□□□ 0.56
Hmga2P52927 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hmga2P52927 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Hmga2P52927 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Hmga2P52927 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Hmga2P52927 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Hmga2P52927 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hmga2P52927 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.53■□□□□ 0.56
Hmga2P52927 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
Hmga2P52927 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC18.53■□□□□ 0.56
Hmga2P52927 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
Hmga2P52927 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hmga2P52927 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Hmga2P52927 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Hmga2P52927 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hmga2P52927 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
Hmga2P52927 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.52■□□□□ 0.56
Hmga2P52927 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Hmga2P52927 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Hmga2P52927 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hmga2P52927 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.51■□□□□ 0.55
Hmga2P52927 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hmga2P52927 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hmga2P52927 AC131739.1-201ENSMUST00000221692 1245 ntBASIC18.51■□□□□ 0.55
Hmga2P52927 Gm4799-201ENSMUST00000095396 657 ntBASIC18.51■□□□□ 0.55
Hmga2P52927 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Hmga2P52927 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hmga2P52927 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hmga2P52927 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hmga2P52927 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hmga2P52927 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hmga2P52927 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Hmga2P52927 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.49■□□□□ 0.55
Hmga2P52927 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hmga2P52927 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC18.49■□□□□ 0.55
Hmga2P52927 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Hmga2P52927 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Hmga2P52927 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hmga2P52927 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.49■□□□□ 0.55
Hmga2P52927 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.49■□□□□ 0.55
Hmga2P52927 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hmga2P52927 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC18.48■□□□□ 0.55
Hmga2P52927 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hmga2P52927 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.48■□□□□ 0.55
Hmga2P52927 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Hmga2P52927 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Hmga2P52927 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hmga2P52927 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hmga2P52927 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hmga2P52927 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hmga2P52927 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Hmga2P52927 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hmga2P52927 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Hmga2P52927 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hmga2P52927 AC122317.2-201ENSMUST00000218708 1248 ntBASIC18.47■□□□□ 0.55
Hmga2P52927 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.47■□□□□ 0.55
Hmga2P52927 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Hmga2P52927 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hmga2P52927 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hmga2P52927 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hmga2P52927 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hmga2P52927 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC18.46■□□□□ 0.55
Hmga2P52927 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.46■□□□□ 0.55
Hmga2P52927 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hmga2P52927 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hmga2P52927 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Hmga2P52927 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.45■□□□□ 0.54
Hmga2P52927 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hmga2P52927 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Hmga2P52927 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Hmga2P52927 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.44■□□□□ 0.54
Hmga2P52927 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Hmga2P52927 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hmga2P52927 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hmga2P52927 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hmga2P52927 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Hmga2P52927 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Hmga2P52927 AC117245.4-201ENSMUST00000217388 1646 ntBASIC18.43■□□□□ 0.54
Hmga2P52927 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.43■□□□□ 0.54
Hmga2P52927 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hmga2P52927 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.43■□□□□ 0.54
Hmga2P52927 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.42■□□□□ 0.54
Hmga2P52927 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hmga2P52927 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Hmga2P52927 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC18.42■□□□□ 0.54
Hmga2P52927 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.42■□□□□ 0.54
Hmga2P52927 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hmga2P52927 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Hmga2P52927 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hmga2P52927 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms