Protein–RNA interactions for Protein: P49962

Srp9, Signal recognition particle 9 kDa protein, mousemouse

Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp9P49962 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Srp9P49962 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Srp9P49962 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Srp9P49962 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Srp9P49962 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Srp9P49962 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Srp9P49962 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Srp9P49962 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.36■□□□□ 0.53
Srp9P49962 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Srp9P49962 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Srp9P49962 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Srp9P49962 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Srp9P49962 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Srp9P49962 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.35■□□□□ 0.53
Srp9P49962 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.35■□□□□ 0.53
Srp9P49962 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Srp9P49962 Gm9812-201ENSMUST00000061934 968 ntBASIC18.35■□□□□ 0.53
Srp9P49962 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Srp9P49962 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Srp9P49962 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Srp9P49962 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Srp9P49962 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Srp9P49962 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Srp9P49962 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Srp9P49962 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC18.34■□□□□ 0.53
Srp9P49962 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Srp9P49962 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Srp9P49962 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Srp9P49962 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Srp9P49962 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Srp9P49962 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Srp9P49962 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.33■□□□□ 0.52
Srp9P49962 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Srp9P49962 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Srp9P49962 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Srp9P49962 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Srp9P49962 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Srp9P49962 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Srp9P49962 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Srp9P49962 AC122317.2-201ENSMUST00000218708 1248 ntBASIC18.32■□□□□ 0.52
Srp9P49962 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.31■□□□□ 0.52
Srp9P49962 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Srp9P49962 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
Srp9P49962 Gm45364-201ENSMUST00000210883 159 ntBASIC18.31■□□□□ 0.52
Srp9P49962 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Srp9P49962 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Srp9P49962 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.3■□□□□ 0.52
Srp9P49962 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Srp9P49962 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Srp9P49962 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Srp9P49962 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Srp9P49962 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Srp9P49962 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
Srp9P49962 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.29■□□□□ 0.52
Srp9P49962 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Srp9P49962 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.29■□□□□ 0.52
Srp9P49962 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Srp9P49962 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.28■□□□□ 0.52
Srp9P49962 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Srp9P49962 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Srp9P49962 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.28■□□□□ 0.52
Srp9P49962 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Srp9P49962 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Srp9P49962 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Srp9P49962 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Srp9P49962 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Srp9P49962 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Srp9P49962 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC18.26■□□□□ 0.51
Srp9P49962 Gm6311-201ENSMUST00000073790 878 ntBASIC18.26■□□□□ 0.51
Srp9P49962 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Srp9P49962 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Srp9P49962 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.26■□□□□ 0.51
Srp9P49962 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Srp9P49962 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Srp9P49962 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.25■□□□□ 0.51
Srp9P49962 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.25■□□□□ 0.51
Srp9P49962 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Srp9P49962 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Srp9P49962 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.25■□□□□ 0.51
Srp9P49962 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.25■□□□□ 0.51
Srp9P49962 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Srp9P49962 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.24■□□□□ 0.51
Srp9P49962 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Srp9P49962 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Srp9P49962 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC18.24■□□□□ 0.51
Srp9P49962 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Srp9P49962 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Srp9P49962 Terc-201ENSMUST00000082862 423 ntBASIC18.24■□□□□ 0.51
Srp9P49962 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Srp9P49962 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Srp9P49962 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Srp9P49962 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Srp9P49962 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.23■□□□□ 0.51
Srp9P49962 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Srp9P49962 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Srp9P49962 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Srp9P49962 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Srp9P49962 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Srp9P49962 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Srp9P49962 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms