Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Hist1h1aP43275 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hist1h1aP43275 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hist1h1aP43275 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hist1h1aP43275 AC164433.2-201ENSMUST00000226346 1701 ntBASIC17.84■□□□□ 0.45
Hist1h1aP43275 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Hist1h1aP43275 Mir3960-201ENSMUST00000198213 73 ntBASIC17.84■□□□□ 0.45
Hist1h1aP43275 Gm7432-201ENSMUST00000210343 879 ntBASIC17.84■□□□□ 0.45
Hist1h1aP43275 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC17.84■□□□□ 0.45
Hist1h1aP43275 AC153911.1-201ENSMUST00000220378 758 ntBASIC17.84■□□□□ 0.45
Hist1h1aP43275 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Hist1h1aP43275 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Hist1h1aP43275 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Hist1h1aP43275 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC17.83■□□□□ 0.44
Hist1h1aP43275 Gm9812-201ENSMUST00000061934 968 ntBASIC17.83■□□□□ 0.44
Hist1h1aP43275 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hist1h1aP43275 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Hist1h1aP43275 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hist1h1aP43275 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hist1h1aP43275 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Hist1h1aP43275 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
Hist1h1aP43275 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Hist1h1aP43275 AC122317.2-201ENSMUST00000218708 1248 ntBASIC17.82■□□□□ 0.44
Hist1h1aP43275 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hist1h1aP43275 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Hist1h1aP43275 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hist1h1aP43275 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hist1h1aP43275 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Hist1h1aP43275 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hist1h1aP43275 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hist1h1aP43275 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Hist1h1aP43275 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC17.81■□□□□ 0.44
Hist1h1aP43275 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hist1h1aP43275 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hist1h1aP43275 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Hist1h1aP43275 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Hist1h1aP43275 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hist1h1aP43275 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hist1h1aP43275 AC154454.1-201ENSMUST00000225253 216 ntBASIC17.81■□□□□ 0.44
Hist1h1aP43275 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Hist1h1aP43275 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hist1h1aP43275 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Hist1h1aP43275 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC17.81■□□□□ 0.44
Hist1h1aP43275 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Hist1h1aP43275 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hist1h1aP43275 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hist1h1aP43275 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hist1h1aP43275 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.8■□□□□ 0.44
Hist1h1aP43275 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Hist1h1aP43275 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hist1h1aP43275 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Hist1h1aP43275 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hist1h1aP43275 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hist1h1aP43275 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Hist1h1aP43275 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Hist1h1aP43275 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Hist1h1aP43275 Gm11599-201ENSMUST00000118720 878 ntBASIC17.79■□□□□ 0.44
Hist1h1aP43275 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
Hist1h1aP43275 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Hist1h1aP43275 Notumos-201ENSMUST00000151998 2659 ntBASIC17.79■□□□□ 0.44
Hist1h1aP43275 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Hist1h1aP43275 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hist1h1aP43275 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hist1h1aP43275 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Hist1h1aP43275 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Hist1h1aP43275 Gm12818-201ENSMUST00000117562 1349 ntBASIC17.78■□□□□ 0.44
Hist1h1aP43275 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Hist1h1aP43275 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC17.78■□□□□ 0.44
Hist1h1aP43275 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hist1h1aP43275 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Hist1h1aP43275 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hist1h1aP43275 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC17.77■□□□□ 0.44
Hist1h1aP43275 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Hist1h1aP43275 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hist1h1aP43275 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Hist1h1aP43275 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hist1h1aP43275 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Hist1h1aP43275 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC17.76■□□□□ 0.43
Hist1h1aP43275 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC17.76■□□□□ 0.43
Hist1h1aP43275 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hist1h1aP43275 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hist1h1aP43275 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Hist1h1aP43275 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hist1h1aP43275 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hist1h1aP43275 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hist1h1aP43275 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC17.75■□□□□ 0.43
Hist1h1aP43275 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hist1h1aP43275 Gm45364-201ENSMUST00000210883 159 ntBASIC17.75■□□□□ 0.43
Hist1h1aP43275 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hist1h1aP43275 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
Hist1h1aP43275 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC17.74■□□□□ 0.43
Hist1h1aP43275 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hist1h1aP43275 Terc-201ENSMUST00000082862 423 ntBASIC17.74■□□□□ 0.43
Hist1h1aP43275 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC17.74■□□□□ 0.43
Hist1h1aP43275 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Hist1h1aP43275 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hist1h1aP43275 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hist1h1aP43275 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hist1h1aP43275 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Hist1h1aP43275 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms