Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nkx2-2P42586 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nkx2-2P42586 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nkx2-2P42586 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nkx2-2P42586 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nkx2-2P42586 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nkx2-2P42586 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Nkx2-2P42586 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nkx2-2P42586 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nkx2-2P42586 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nkx2-2P42586 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nkx2-2P42586 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.04■□□□□ 0.8
Nkx2-2P42586 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nkx2-2P42586 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nkx2-2P42586 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Nkx2-2P42586 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nkx2-2P42586 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nkx2-2P42586 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nkx2-2P42586 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nkx2-2P42586 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nkx2-2P42586 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Nkx2-2P42586 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nkx2-2P42586 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nkx2-2P42586 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nkx2-2P42586 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nkx2-2P42586 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.02■□□□□ 0.8
Nkx2-2P42586 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Nkx2-2P42586 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nkx2-2P42586 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Nkx2-2P42586 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Nkx2-2P42586 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Nkx2-2P42586 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nkx2-2P42586 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Nkx2-2P42586 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nkx2-2P42586 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nkx2-2P42586 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Nkx2-2P42586 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nkx2-2P42586 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20■□□□□ 0.79
Nkx2-2P42586 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nkx2-2P42586 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nkx2-2P42586 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Nkx2-2P42586 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nkx2-2P42586 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nkx2-2P42586 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Nkx2-2P42586 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nkx2-2P42586 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Nkx2-2P42586 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nkx2-2P42586 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
Nkx2-2P42586 Gm10420-201ENSMUST00000121713 882 ntBASIC19.99■□□□□ 0.79
Nkx2-2P42586 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Nkx2-2P42586 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nkx2-2P42586 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Nkx2-2P42586 Cap2-205ENSMUST00000225824 1634 ntBASIC19.98■□□□□ 0.79
Nkx2-2P42586 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nkx2-2P42586 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nkx2-2P42586 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.98■□□□□ 0.79
Nkx2-2P42586 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nkx2-2P42586 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nkx2-2P42586 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Nkx2-2P42586 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nkx2-2P42586 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nkx2-2P42586 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nkx2-2P42586 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Nkx2-2P42586 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nkx2-2P42586 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.97■□□□□ 0.79
Nkx2-2P42586 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nkx2-2P42586 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Nkx2-2P42586 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nkx2-2P42586 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nkx2-2P42586 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nkx2-2P42586 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nkx2-2P42586 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
Nkx2-2P42586 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nkx2-2P42586 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Nkx2-2P42586 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.95■□□□□ 0.78
Nkx2-2P42586 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Nkx2-2P42586 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nkx2-2P42586 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
Nkx2-2P42586 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nkx2-2P42586 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.95■□□□□ 0.78
Nkx2-2P42586 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nkx2-2P42586 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nkx2-2P42586 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.94■□□□□ 0.78
Nkx2-2P42586 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nkx2-2P42586 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Nkx2-2P42586 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nkx2-2P42586 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.94■□□□□ 0.78
Nkx2-2P42586 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nkx2-2P42586 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.93■□□□□ 0.78
Nkx2-2P42586 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nkx2-2P42586 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
Nkx2-2P42586 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Nkx2-2P42586 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Nkx2-2P42586 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Nkx2-2P42586 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nkx2-2P42586 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Nkx2-2P42586 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nkx2-2P42586 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Nkx2-2P42586 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nkx2-2P42586 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.92■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms