Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
Nedd8P29595 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nedd8P29595 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nedd8P29595 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Nedd8P29595 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nedd8P29595 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Nedd8P29595 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.14■□□□□ 0.81
Nedd8P29595 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nedd8P29595 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nedd8P29595 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Nedd8P29595 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nedd8P29595 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nedd8P29595 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nedd8P29595 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Nedd8P29595 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nedd8P29595 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nedd8P29595 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nedd8P29595 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.13■□□□□ 0.81
Nedd8P29595 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Nedd8P29595 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nedd8P29595 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Nedd8P29595 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.12■□□□□ 0.81
Nedd8P29595 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Nedd8P29595 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nedd8P29595 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nedd8P29595 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nedd8P29595 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nedd8P29595 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nedd8P29595 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Nedd8P29595 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Nedd8P29595 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nedd8P29595 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nedd8P29595 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nedd8P29595 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.1■□□□□ 0.81
Nedd8P29595 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nedd8P29595 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nedd8P29595 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.09■□□□□ 0.81
Nedd8P29595 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Nedd8P29595 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nedd8P29595 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nedd8P29595 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
Nedd8P29595 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Nedd8P29595 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nedd8P29595 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nedd8P29595 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Nedd8P29595 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Nedd8P29595 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Nedd8P29595 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nedd8P29595 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nedd8P29595 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.07■□□□□ 0.8
Nedd8P29595 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nedd8P29595 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nedd8P29595 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.07■□□□□ 0.8
Nedd8P29595 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nedd8P29595 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.07■□□□□ 0.8
Nedd8P29595 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nedd8P29595 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nedd8P29595 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nedd8P29595 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nedd8P29595 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nedd8P29595 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nedd8P29595 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nedd8P29595 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nedd8P29595 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nedd8P29595 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.05■□□□□ 0.8
Nedd8P29595 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nedd8P29595 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Nedd8P29595 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nedd8P29595 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nedd8P29595 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nedd8P29595 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nedd8P29595 Gm24804-201ENSMUST00000174982 85 ntBASIC20.04■□□□□ 0.8
Nedd8P29595 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nedd8P29595 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nedd8P29595 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nedd8P29595 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nedd8P29595 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Nedd8P29595 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nedd8P29595 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nedd8P29595 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nedd8P29595 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nedd8P29595 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.02■□□□□ 0.8
Nedd8P29595 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.02■□□□□ 0.8
Nedd8P29595 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nedd8P29595 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nedd8P29595 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nedd8P29595 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC20.02■□□□□ 0.8
Nedd8P29595 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Nedd8P29595 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nedd8P29595 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Nedd8P29595 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nedd8P29595 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Nedd8P29595 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Nedd8P29595 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Nedd8P29595 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.01■□□□□ 0.79
Nedd8P29595 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nedd8P29595 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
Nedd8P29595 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nedd8P29595 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Nedd8P29595 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms