Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ApoeP08226 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ApoeP08226 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ApoeP08226 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
ApoeP08226 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ApoeP08226 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
ApoeP08226 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ApoeP08226 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
ApoeP08226 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ApoeP08226 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ApoeP08226 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ApoeP08226 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
ApoeP08226 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.54■□□□□ 0.88
ApoeP08226 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ApoeP08226 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
ApoeP08226 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ApoeP08226 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ApoeP08226 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.53■□□□□ 0.88
ApoeP08226 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
ApoeP08226 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ApoeP08226 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ApoeP08226 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ApoeP08226 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ApoeP08226 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ApoeP08226 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.52■□□□□ 0.88
ApoeP08226 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ApoeP08226 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.52■□□□□ 0.88
ApoeP08226 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ApoeP08226 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.52■□□□□ 0.88
ApoeP08226 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.52■□□□□ 0.88
ApoeP08226 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ApoeP08226 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
ApoeP08226 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
ApoeP08226 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
ApoeP08226 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ApoeP08226 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ApoeP08226 Gm9812-201ENSMUST00000061934 968 ntBASIC20.51■□□□□ 0.87
ApoeP08226 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ApoeP08226 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.51■□□□□ 0.87
ApoeP08226 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ApoeP08226 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ApoeP08226 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ApoeP08226 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ApoeP08226 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
ApoeP08226 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.5■□□□□ 0.87
ApoeP08226 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.5■□□□□ 0.87
ApoeP08226 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
ApoeP08226 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ApoeP08226 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.5■□□□□ 0.87
ApoeP08226 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
ApoeP08226 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ApoeP08226 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ApoeP08226 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ApoeP08226 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ApoeP08226 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.49■□□□□ 0.87
ApoeP08226 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ApoeP08226 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ApoeP08226 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
ApoeP08226 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.48■□□□□ 0.87
ApoeP08226 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ApoeP08226 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ApoeP08226 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ApoeP08226 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
ApoeP08226 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
ApoeP08226 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ApoeP08226 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
ApoeP08226 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ApoeP08226 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ApoeP08226 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
ApoeP08226 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.46■□□□□ 0.87
ApoeP08226 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.46■□□□□ 0.87
ApoeP08226 Gm4799-201ENSMUST00000095396 657 ntBASIC20.46■□□□□ 0.87
ApoeP08226 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
ApoeP08226 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
ApoeP08226 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
ApoeP08226 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
ApoeP08226 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ApoeP08226 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.45■□□□□ 0.86
ApoeP08226 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
ApoeP08226 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ApoeP08226 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.45■□□□□ 0.86
ApoeP08226 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ApoeP08226 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
ApoeP08226 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ApoeP08226 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
ApoeP08226 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ApoeP08226 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.44■□□□□ 0.86
ApoeP08226 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
ApoeP08226 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.44■□□□□ 0.86
ApoeP08226 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
ApoeP08226 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.44■□□□□ 0.86
ApoeP08226 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ApoeP08226 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
ApoeP08226 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
ApoeP08226 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
ApoeP08226 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
ApoeP08226 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
ApoeP08226 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ApoeP08226 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
ApoeP08226 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.42■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms