Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.74■□□□□ 0.43
P04940 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
P04940 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
P04940 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
P04940 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC17.74■□□□□ 0.43
P04940 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
P04940 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
P04940 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
P04940 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC17.74■□□□□ 0.43
P04940 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
P04940 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
P04940 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
P04940 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
P04940 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
P04940 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC17.73■□□□□ 0.43
P04940 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
P04940 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
P04940 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
P04940 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
P04940 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
P04940 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
P04940 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
P04940 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
P04940 Gm7332-201ENSMUST00000118351 454 ntBASIC17.72■□□□□ 0.43
P04940 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
P04940 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
P04940 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
P04940 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
P04940 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
P04940 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
P04940 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
P04940 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC17.71■□□□□ 0.43
P04940 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC17.71■□□□□ 0.43
P04940 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
P04940 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
P04940 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
P04940 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
P04940 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
P04940 AC115037.1-201ENSMUST00000223391 2173 ntBASIC17.7■□□□□ 0.42
P04940 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
P04940 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
P04940 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
P04940 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
P04940 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
P04940 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
P04940 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
P04940 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
P04940 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
P04940 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
P04940 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.69■□□□□ 0.42
P04940 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
P04940 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
P04940 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
P04940 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
P04940 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
P04940 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
P04940 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC17.68■□□□□ 0.42
P04940 Gm12366-201ENSMUST00000121722 873 ntBASIC17.68■□□□□ 0.42
P04940 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
P04940 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC17.68■□□□□ 0.42
P04940 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC17.68■□□□□ 0.42
P04940 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
P04940 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
P04940 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC17.68■□□□□ 0.42
P04940 Gm5786-201ENSMUST00000085368 882 ntBASIC17.68■□□□□ 0.42
P04940 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
P04940 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
P04940 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
P04940 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
P04940 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
P04940 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
P04940 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
P04940 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
P04940 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
P04940 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.67■□□□□ 0.42
P04940 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
P04940 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
P04940 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
P04940 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
P04940 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
P04940 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
P04940 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
P04940 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
P04940 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
P04940 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
P04940 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
P04940 AC153962.1-201ENSMUST00000218530 1948 ntBASIC17.65■□□□□ 0.42
P04940 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
P04940 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
P04940 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
P04940 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC17.65■□□□□ 0.42
P04940 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
P04940 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
P04940 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
P04940 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
P04940 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
P04940 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
P04940 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC17.64■□□□□ 0.41
P04940 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
P04940 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 116 ms