Protein–RNA interactions for Protein: P04104

Krt1, Keratin, type II cytoskeletal 1, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt1P04104 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.58■□□□□ 0.88
Krt1P04104 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.57■□□□□ 0.88
Krt1P04104 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Krt1P04104 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Krt1P04104 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Krt1P04104 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC20.57■□□□□ 0.88
Krt1P04104 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Krt1P04104 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Krt1P04104 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Krt1P04104 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Krt1P04104 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Krt1P04104 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Krt1P04104 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Krt1P04104 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Krt1P04104 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.56■□□□□ 0.88
Krt1P04104 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Krt1P04104 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Krt1P04104 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Krt1P04104 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Krt1P04104 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Krt1P04104 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Krt1P04104 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Krt1P04104 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Krt1P04104 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.55■□□□□ 0.88
Krt1P04104 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Krt1P04104 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Krt1P04104 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Krt1P04104 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Krt1P04104 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Krt1P04104 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Krt1P04104 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Krt1P04104 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.54■□□□□ 0.88
Krt1P04104 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Krt1P04104 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.54■□□□□ 0.88
Krt1P04104 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Krt1P04104 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Krt1P04104 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Krt1P04104 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Krt1P04104 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.52■□□□□ 0.88
Krt1P04104 Gm24970-201ENSMUST00000175582 82 ntBASIC20.52■□□□□ 0.88
Krt1P04104 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Krt1P04104 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Krt1P04104 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.51■□□□□ 0.87
Krt1P04104 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Krt1P04104 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.51■□□□□ 0.87
Krt1P04104 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Krt1P04104 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Krt1P04104 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.51■□□□□ 0.87
Krt1P04104 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Krt1P04104 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Krt1P04104 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Krt1P04104 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Krt1P04104 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Krt1P04104 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Krt1P04104 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Krt1P04104 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Krt1P04104 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
Krt1P04104 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.48■□□□□ 0.87
Krt1P04104 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Krt1P04104 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Krt1P04104 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Krt1P04104 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Krt1P04104 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Krt1P04104 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Krt1P04104 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Krt1P04104 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Krt1P04104 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.47■□□□□ 0.87
Krt1P04104 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Krt1P04104 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Krt1P04104 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.47■□□□□ 0.87
Krt1P04104 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Krt1P04104 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Krt1P04104 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Krt1P04104 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Krt1P04104 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.45■□□□□ 0.86
Krt1P04104 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Krt1P04104 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Krt1P04104 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Krt1P04104 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Krt1P04104 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.45■□□□□ 0.86
Krt1P04104 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Krt1P04104 Gm22567-201ENSMUST00000175542 342 ntBASIC20.44■□□□□ 0.86
Krt1P04104 Zfp131-205ENSMUST00000223812 663 ntBASIC20.44■□□□□ 0.86
Krt1P04104 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Krt1P04104 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Krt1P04104 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Krt1P04104 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Krt1P04104 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Krt1P04104 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Krt1P04104 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
Krt1P04104 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Krt1P04104 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.43■□□□□ 0.86
Krt1P04104 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Krt1P04104 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Krt1P04104 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Krt1P04104 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Krt1P04104 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Krt1P04104 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Krt1P04104 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Krt1P04104 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 109.4 ms