Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.72■□□□□ 0.91
Hcn1O88704 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Hcn1O88704 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.72■□□□□ 0.91
Hcn1O88704 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hcn1O88704 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hcn1O88704 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.71■□□□□ 0.91
Hcn1O88704 Gm14523-201ENSMUST00000117260 558 ntBASIC20.71■□□□□ 0.91
Hcn1O88704 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Hcn1O88704 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Hcn1O88704 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
Hcn1O88704 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hcn1O88704 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.7■□□□□ 0.91
Hcn1O88704 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Hcn1O88704 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hcn1O88704 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hcn1O88704 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hcn1O88704 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hcn1O88704 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.7■□□□□ 0.9
Hcn1O88704 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Hcn1O88704 Gm44428-201ENSMUST00000204474 874 ntBASIC20.69■□□□□ 0.9
Hcn1O88704 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Hcn1O88704 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Hcn1O88704 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hcn1O88704 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.68■□□□□ 0.9
Hcn1O88704 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.68■□□□□ 0.9
Hcn1O88704 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Hcn1O88704 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Hcn1O88704 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Hcn1O88704 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hcn1O88704 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hcn1O88704 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hcn1O88704 Gm7332-201ENSMUST00000118351 454 ntBASIC20.67■□□□□ 0.9
Hcn1O88704 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Hcn1O88704 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Hcn1O88704 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.67■□□□□ 0.9
Hcn1O88704 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hcn1O88704 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hcn1O88704 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hcn1O88704 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hcn1O88704 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hcn1O88704 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Hcn1O88704 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hcn1O88704 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hcn1O88704 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hcn1O88704 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hcn1O88704 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Hcn1O88704 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.65■□□□□ 0.9
Hcn1O88704 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hcn1O88704 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.65■□□□□ 0.9
Hcn1O88704 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hcn1O88704 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Hcn1O88704 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.64■□□□□ 0.89
Hcn1O88704 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hcn1O88704 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hcn1O88704 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hcn1O88704 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hcn1O88704 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.63■□□□□ 0.89
Hcn1O88704 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.63■□□□□ 0.89
Hcn1O88704 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hcn1O88704 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.62■□□□□ 0.89
Hcn1O88704 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hcn1O88704 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hcn1O88704 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.62■□□□□ 0.89
Hcn1O88704 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Hcn1O88704 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hcn1O88704 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hcn1O88704 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hcn1O88704 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Hcn1O88704 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hcn1O88704 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
Hcn1O88704 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hcn1O88704 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hcn1O88704 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Hcn1O88704 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hcn1O88704 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Hcn1O88704 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.6■□□□□ 0.89
Hcn1O88704 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.6■□□□□ 0.89
Hcn1O88704 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Hcn1O88704 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.6■□□□□ 0.89
Hcn1O88704 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hcn1O88704 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hcn1O88704 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.59■□□□□ 0.89
Hcn1O88704 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Hcn1O88704 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.59■□□□□ 0.89
Hcn1O88704 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Hcn1O88704 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hcn1O88704 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Hcn1O88704 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hcn1O88704 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hcn1O88704 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hcn1O88704 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.57■□□□□ 0.88
Hcn1O88704 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hcn1O88704 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Hcn1O88704 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Hcn1O88704 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Hcn1O88704 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Hcn1O88704 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Hcn1O88704 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hcn1O88704 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Hcn1O88704 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms