Protein–RNA interactions for Protein: O54991

Cntnap1, Contactin-associated protein 1, mousemouse

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap1O54991 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Cntnap1O54991 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC29.44■■■□□ 2.3
Cntnap1O54991 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC29.44■■■□□ 2.3
Cntnap1O54991 Gm28536-201ENSMUST00000190971 1317 ntBASIC29.44■■■□□ 2.3
Cntnap1O54991 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Cntnap1O54991 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Cntnap1O54991 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC29.43■■■□□ 2.3
Cntnap1O54991 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC29.43■■■□□ 2.3
Cntnap1O54991 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Cntnap1O54991 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC29.42■■■□□ 2.3
Cntnap1O54991 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC29.42■■■□□ 2.3
Cntnap1O54991 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
Cntnap1O54991 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC29.42■■■□□ 2.3
Cntnap1O54991 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
Cntnap1O54991 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC29.42■■■□□ 2.3
Cntnap1O54991 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC29.42■■■□□ 2.3
Cntnap1O54991 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Cntnap1O54991 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC29.42■■■□□ 2.3
Cntnap1O54991 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC29.42■■■□□ 2.3
Cntnap1O54991 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC29.41■■■□□ 2.3
Cntnap1O54991 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC29.41■■■□□ 2.3
Cntnap1O54991 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Cntnap1O54991 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Cntnap1O54991 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Cntnap1O54991 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC29.4■■■□□ 2.3
Cntnap1O54991 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
Cntnap1O54991 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Cntnap1O54991 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC29.39■■■□□ 2.3
Cntnap1O54991 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC29.39■■■□□ 2.3
Cntnap1O54991 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
Cntnap1O54991 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
Cntnap1O54991 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC29.39■■■□□ 2.29
Cntnap1O54991 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC29.39■■■□□ 2.29
Cntnap1O54991 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
Cntnap1O54991 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Cntnap1O54991 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Cntnap1O54991 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC29.38■■■□□ 2.29
Cntnap1O54991 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Cntnap1O54991 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC29.37■■■□□ 2.29
Cntnap1O54991 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC29.37■■■□□ 2.29
Cntnap1O54991 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC29.37■■■□□ 2.29
Cntnap1O54991 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC29.37■■■□□ 2.29
Cntnap1O54991 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC29.36■■■□□ 2.29
Cntnap1O54991 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC29.36■■■□□ 2.29
Cntnap1O54991 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC29.36■■■□□ 2.29
Cntnap1O54991 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Cntnap1O54991 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC29.35■■■□□ 2.29
Cntnap1O54991 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Cntnap1O54991 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Cntnap1O54991 Gm6139-201ENSMUST00000079261 882 ntBASIC29.35■■■□□ 2.29
Cntnap1O54991 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
Cntnap1O54991 Gm27011-201ENSMUST00000182352 972 ntBASIC29.34■■■□□ 2.29
Cntnap1O54991 Gm10399-202ENSMUST00000202768 748 ntBASIC29.34■■■□□ 2.29
Cntnap1O54991 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Cntnap1O54991 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Cntnap1O54991 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
Cntnap1O54991 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC29.32■■■□□ 2.28
Cntnap1O54991 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Cntnap1O54991 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Cntnap1O54991 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Cntnap1O54991 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Cntnap1O54991 Gm21168-201ENSMUST00000199646 1096 ntBASIC29.31■■■□□ 2.28
Cntnap1O54991 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Cntnap1O54991 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Cntnap1O54991 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Cntnap1O54991 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC29.29■■■□□ 2.28
Cntnap1O54991 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC29.29■■■□□ 2.28
Cntnap1O54991 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC29.29■■■□□ 2.28
Cntnap1O54991 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Cntnap1O54991 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Cntnap1O54991 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
Cntnap1O54991 Gm7199-201ENSMUST00000118327 1485 ntBASIC29.28■■■□□ 2.28
Cntnap1O54991 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
Cntnap1O54991 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC29.26■■■□□ 2.28
Cntnap1O54991 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC29.26■■■□□ 2.27
Cntnap1O54991 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Cntnap1O54991 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC29.26■■■□□ 2.27
Cntnap1O54991 Gm5874-201ENSMUST00000096101 508 ntBASIC29.26■■■□□ 2.27
Cntnap1O54991 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC29.25■■■□□ 2.27
Cntnap1O54991 Gm7291-201ENSMUST00000199147 382 ntBASIC29.25■■■□□ 2.27
Cntnap1O54991 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC29.24■■■□□ 2.27
Cntnap1O54991 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
Cntnap1O54991 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Cntnap1O54991 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC29.24■■■□□ 2.27
Cntnap1O54991 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC29.23■■■□□ 2.27
Cntnap1O54991 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Cntnap1O54991 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC29.23■■■□□ 2.27
Cntnap1O54991 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC29.22■■■□□ 2.27
Cntnap1O54991 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Cntnap1O54991 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Cntnap1O54991 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC29.21■■■□□ 2.27
Cntnap1O54991 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC29.21■■■□□ 2.27
Cntnap1O54991 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC29.21■■■□□ 2.27
Cntnap1O54991 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC29.21■■■□□ 2.27
Cntnap1O54991 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC29.21■■■□□ 2.27
Cntnap1O54991 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Cntnap1O54991 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Cntnap1O54991 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC29.21■■■□□ 2.27
Cntnap1O54991 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC29.2■■■□□ 2.27
Cntnap1O54991 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC29.2■■■□□ 2.26
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms