Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Nr1i3O35627 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
Nr1i3O35627 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Nr1i3O35627 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Nr1i3O35627 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Nr1i3O35627 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Nr1i3O35627 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Nr1i3O35627 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC23.49■■□□□ 1.35
Nr1i3O35627 AC117769.4-201ENSMUST00000225679 685 ntBASIC23.49■■□□□ 1.35
Nr1i3O35627 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
Nr1i3O35627 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
Nr1i3O35627 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Nr1i3O35627 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Nr1i3O35627 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Nr1i3O35627 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Nr1i3O35627 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Nr1i3O35627 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Nr1i3O35627 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Nr1i3O35627 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Nr1i3O35627 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC23.47■■□□□ 1.35
Nr1i3O35627 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Nr1i3O35627 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
Nr1i3O35627 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Nr1i3O35627 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Nr1i3O35627 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
Nr1i3O35627 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC23.45■■□□□ 1.34
Nr1i3O35627 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Nr1i3O35627 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC23.45■■□□□ 1.34
Nr1i3O35627 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
Nr1i3O35627 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Nr1i3O35627 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC23.45■■□□□ 1.34
Nr1i3O35627 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
Nr1i3O35627 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Nr1i3O35627 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Nr1i3O35627 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC23.44■■□□□ 1.34
Nr1i3O35627 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Nr1i3O35627 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Nr1i3O35627 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Nr1i3O35627 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC23.43■■□□□ 1.34
Nr1i3O35627 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC23.43■■□□□ 1.34
Nr1i3O35627 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC23.43■■□□□ 1.34
Nr1i3O35627 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
Nr1i3O35627 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Nr1i3O35627 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Nr1i3O35627 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Nr1i3O35627 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
Nr1i3O35627 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC23.42■■□□□ 1.34
Nr1i3O35627 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC23.42■■□□□ 1.34
Nr1i3O35627 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
Nr1i3O35627 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC23.41■■□□□ 1.34
Nr1i3O35627 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Nr1i3O35627 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Nr1i3O35627 Gm9806-201ENSMUST00000051080 552 ntBASIC23.41■■□□□ 1.34
Nr1i3O35627 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC23.41■■□□□ 1.34
Nr1i3O35627 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Nr1i3O35627 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Nr1i3O35627 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Nr1i3O35627 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
Nr1i3O35627 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Nr1i3O35627 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
Nr1i3O35627 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
Nr1i3O35627 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Nr1i3O35627 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
Nr1i3O35627 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC23.39■■□□□ 1.34
Nr1i3O35627 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Nr1i3O35627 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.34
Nr1i3O35627 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Nr1i3O35627 Scarna2-201ENSMUST00000157560 414 ntBASIC23.39■■□□□ 1.33
Nr1i3O35627 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC23.39■■□□□ 1.33
Nr1i3O35627 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC23.39■■□□□ 1.33
Nr1i3O35627 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
Nr1i3O35627 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC23.38■■□□□ 1.33
Nr1i3O35627 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Nr1i3O35627 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC23.38■■□□□ 1.33
Nr1i3O35627 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC23.38■■□□□ 1.33
Nr1i3O35627 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Nr1i3O35627 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC23.37■■□□□ 1.33
Nr1i3O35627 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Nr1i3O35627 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC23.37■■□□□ 1.33
Nr1i3O35627 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Nr1i3O35627 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Nr1i3O35627 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Nr1i3O35627 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Nr1i3O35627 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Nr1i3O35627 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Nr1i3O35627 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
Nr1i3O35627 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Nr1i3O35627 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Nr1i3O35627 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Nr1i3O35627 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Nr1i3O35627 Gm16437-201ENSMUST00000025669 507 ntBASIC23.35■■□□□ 1.33
Nr1i3O35627 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Nr1i3O35627 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC23.35■■□□□ 1.33
Nr1i3O35627 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Nr1i3O35627 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC23.34■■□□□ 1.33
Nr1i3O35627 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC23.34■■□□□ 1.33
Nr1i3O35627 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Nr1i3O35627 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Nr1i3O35627 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Nr1i3O35627 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms