Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.21■□□□□ 0.99
Npc1O35604 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Npc1O35604 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.21■□□□□ 0.99
Npc1O35604 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Npc1O35604 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Npc1O35604 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Npc1O35604 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
Npc1O35604 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Npc1O35604 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Npc1O35604 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Npc1O35604 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.2■□□□□ 0.98
Npc1O35604 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Npc1O35604 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.2■□□□□ 0.98
Npc1O35604 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Npc1O35604 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Npc1O35604 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Npc1O35604 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Npc1O35604 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.19■□□□□ 0.98
Npc1O35604 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Npc1O35604 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Npc1O35604 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Npc1O35604 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.18■□□□□ 0.98
Npc1O35604 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Npc1O35604 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Npc1O35604 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Npc1O35604 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Npc1O35604 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Npc1O35604 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Npc1O35604 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Npc1O35604 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Npc1O35604 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Npc1O35604 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Npc1O35604 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Npc1O35604 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Npc1O35604 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Npc1O35604 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Npc1O35604 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Npc1O35604 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Npc1O35604 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Npc1O35604 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Npc1O35604 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Npc1O35604 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Npc1O35604 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.14■□□□□ 0.97
Npc1O35604 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Npc1O35604 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.14■□□□□ 0.97
Npc1O35604 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Npc1O35604 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Npc1O35604 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Npc1O35604 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Npc1O35604 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Npc1O35604 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Npc1O35604 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Npc1O35604 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.13■□□□□ 0.97
Npc1O35604 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Npc1O35604 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Npc1O35604 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
Npc1O35604 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Npc1O35604 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Npc1O35604 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Npc1O35604 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Npc1O35604 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Npc1O35604 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Npc1O35604 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Npc1O35604 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Npc1O35604 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Npc1O35604 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Npc1O35604 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Npc1O35604 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Npc1O35604 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Npc1O35604 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Npc1O35604 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.1■□□□□ 0.97
Npc1O35604 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.1■□□□□ 0.97
Npc1O35604 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Npc1O35604 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Npc1O35604 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.1■□□□□ 0.97
Npc1O35604 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Npc1O35604 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Npc1O35604 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.09■□□□□ 0.97
Npc1O35604 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Npc1O35604 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.09■□□□□ 0.97
Npc1O35604 Gm45444-201ENSMUST00000211394 898 ntBASIC21.09■□□□□ 0.97
Npc1O35604 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.09■□□□□ 0.97
Npc1O35604 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Npc1O35604 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Npc1O35604 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Npc1O35604 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.08■□□□□ 0.97
Npc1O35604 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Npc1O35604 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Npc1O35604 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Npc1O35604 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
Npc1O35604 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
Npc1O35604 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Npc1O35604 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Npc1O35604 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
Npc1O35604 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Npc1O35604 Gm43566-201ENSMUST00000196851 808 ntBASIC21.07■□□□□ 0.96
Npc1O35604 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Npc1O35604 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Npc1O35604 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Npc1O35604 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 8.5 ms