Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Slc1a6O35544 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Slc1a6O35544 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Slc1a6O35544 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Slc1a6O35544 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Slc1a6O35544 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.44■■□□□ 1.02
Slc1a6O35544 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Slc1a6O35544 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Slc1a6O35544 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Slc1a6O35544 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.43■■□□□ 1.02
Slc1a6O35544 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Slc1a6O35544 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Slc1a6O35544 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Slc1a6O35544 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.43■■□□□ 1.02
Slc1a6O35544 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Slc1a6O35544 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Slc1a6O35544 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.42■■□□□ 1.02
Slc1a6O35544 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Slc1a6O35544 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Slc1a6O35544 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Slc1a6O35544 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.41■■□□□ 1.02
Slc1a6O35544 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Slc1a6O35544 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Slc1a6O35544 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Slc1a6O35544 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Slc1a6O35544 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.41■■□□□ 1.02
Slc1a6O35544 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.41■■□□□ 1.02
Slc1a6O35544 Terc-201ENSMUST00000082862 423 ntBASIC21.41■■□□□ 1.02
Slc1a6O35544 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Slc1a6O35544 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Slc1a6O35544 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.4■■□□□ 1.02
Slc1a6O35544 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.4■■□□□ 1.02
Slc1a6O35544 Mir3960-201ENSMUST00000198213 73 ntBASIC21.4■■□□□ 1.02
Slc1a6O35544 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Slc1a6O35544 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Slc1a6O35544 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
Slc1a6O35544 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Slc1a6O35544 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Slc1a6O35544 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.39■■□□□ 1.01
Slc1a6O35544 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Slc1a6O35544 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Slc1a6O35544 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.38■■□□□ 1.01
Slc1a6O35544 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Slc1a6O35544 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Slc1a6O35544 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Slc1a6O35544 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Slc1a6O35544 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Slc1a6O35544 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.38■■□□□ 1.01
Slc1a6O35544 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Slc1a6O35544 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Slc1a6O35544 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Slc1a6O35544 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Slc1a6O35544 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Slc1a6O35544 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.37■■□□□ 1.01
Slc1a6O35544 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Slc1a6O35544 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Slc1a6O35544 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.37■■□□□ 1.01
Slc1a6O35544 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Slc1a6O35544 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Slc1a6O35544 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Slc1a6O35544 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Slc1a6O35544 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Slc1a6O35544 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
Slc1a6O35544 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Slc1a6O35544 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Slc1a6O35544 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Slc1a6O35544 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.36■■□□□ 1.01
Slc1a6O35544 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Slc1a6O35544 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Slc1a6O35544 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC21.35■■□□□ 1.01
Slc1a6O35544 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Slc1a6O35544 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Slc1a6O35544 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Slc1a6O35544 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Slc1a6O35544 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Slc1a6O35544 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Slc1a6O35544 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Slc1a6O35544 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Slc1a6O35544 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.34■■□□□ 1.01
Slc1a6O35544 Gm8503-201ENSMUST00000118131 455 ntBASIC21.33■■□□□ 1.01
Slc1a6O35544 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.33■■□□□ 1
Slc1a6O35544 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Slc1a6O35544 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Slc1a6O35544 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.32■■□□□ 1
Slc1a6O35544 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Slc1a6O35544 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Slc1a6O35544 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Slc1a6O35544 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Slc1a6O35544 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.32■■□□□ 1
Slc1a6O35544 Gm45364-201ENSMUST00000210883 159 ntBASIC21.32■■□□□ 1
Slc1a6O35544 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Slc1a6O35544 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Slc1a6O35544 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.32■■□□□ 1
Slc1a6O35544 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.32■■□□□ 1
Slc1a6O35544 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Slc1a6O35544 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
Slc1a6O35544 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Slc1a6O35544 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.31■■□□□ 1
Slc1a6O35544 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Slc1a6O35544 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms