Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tnfsf11O35235 Gm37415-201ENSMUST00000192265 2054 ntBASIC16.93■□□□□ 0.3
Tnfsf11O35235 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Tnfsf11O35235 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC16.93■□□□□ 0.3
Tnfsf11O35235 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tnfsf11O35235 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Tnfsf11O35235 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tnfsf11O35235 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Tnfsf11O35235 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tnfsf11O35235 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Tnfsf11O35235 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tnfsf11O35235 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC16.92■□□□□ 0.3
Tnfsf11O35235 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Tnfsf11O35235 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Tnfsf11O35235 Gm9910-201ENSMUST00000195385 1550 ntBASIC16.91■□□□□ 0.3
Tnfsf11O35235 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfsf11O35235 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfsf11O35235 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfsf11O35235 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfsf11O35235 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfsf11O35235 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfsf11O35235 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
Tnfsf11O35235 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Tnfsf11O35235 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tnfsf11O35235 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tnfsf11O35235 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tnfsf11O35235 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tnfsf11O35235 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tnfsf11O35235 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Tnfsf11O35235 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
Tnfsf11O35235 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tnfsf11O35235 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC16.9■□□□□ 0.3
Tnfsf11O35235 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
Tnfsf11O35235 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Tnfsf11O35235 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Tnfsf11O35235 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tnfsf11O35235 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tnfsf11O35235 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Tnfsf11O35235 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tnfsf11O35235 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Tnfsf11O35235 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tnfsf11O35235 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Tnfsf11O35235 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tnfsf11O35235 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Tnfsf11O35235 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tnfsf11O35235 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tnfsf11O35235 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC16.88■□□□□ 0.29
Tnfsf11O35235 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
Tnfsf11O35235 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Tnfsf11O35235 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tnfsf11O35235 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tnfsf11O35235 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tnfsf11O35235 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tnfsf11O35235 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tnfsf11O35235 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC16.87■□□□□ 0.29
Tnfsf11O35235 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Tnfsf11O35235 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Tnfsf11O35235 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Tnfsf11O35235 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tnfsf11O35235 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC16.86■□□□□ 0.29
Tnfsf11O35235 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Tnfsf11O35235 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC16.86■□□□□ 0.29
Tnfsf11O35235 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tnfsf11O35235 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tnfsf11O35235 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tnfsf11O35235 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Tnfsf11O35235 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tnfsf11O35235 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tnfsf11O35235 AC115037.1-201ENSMUST00000223391 2173 ntBASIC16.85■□□□□ 0.29
Tnfsf11O35235 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tnfsf11O35235 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tnfsf11O35235 Gm28731-201ENSMUST00000185564 1569 ntBASIC16.84■□□□□ 0.29
Tnfsf11O35235 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tnfsf11O35235 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Tnfsf11O35235 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Tnfsf11O35235 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tnfsf11O35235 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tnfsf11O35235 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Tnfsf11O35235 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Tnfsf11O35235 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tnfsf11O35235 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Tnfsf11O35235 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tnfsf11O35235 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Tnfsf11O35235 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tnfsf11O35235 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tnfsf11O35235 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tnfsf11O35235 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tnfsf11O35235 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC16.82■□□□□ 0.28
Tnfsf11O35235 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Tnfsf11O35235 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tnfsf11O35235 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Tnfsf11O35235 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Tnfsf11O35235 Nkain2-201ENSMUST00000092602 558 ntBASIC16.82■□□□□ 0.28
Tnfsf11O35235 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tnfsf11O35235 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Tnfsf11O35235 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tnfsf11O35235 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tnfsf11O35235 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tnfsf11O35235 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Tnfsf11O35235 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms