Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC28.62■■■□□ 2.17
Col15a1O35206 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Col15a1O35206 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
Col15a1O35206 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
Col15a1O35206 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
Col15a1O35206 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC28.62■■■□□ 2.17
Col15a1O35206 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Col15a1O35206 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Col15a1O35206 AC117245.4-201ENSMUST00000217388 1646 ntBASIC28.61■■■□□ 2.17
Col15a1O35206 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Col15a1O35206 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Col15a1O35206 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Col15a1O35206 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC28.61■■■□□ 2.17
Col15a1O35206 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC28.61■■■□□ 2.17
Col15a1O35206 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
Col15a1O35206 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC28.61■■■□□ 2.17
Col15a1O35206 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Col15a1O35206 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
Col15a1O35206 Gm21956-201ENSMUST00000179946 522 ntBASIC28.6■■■□□ 2.17
Col15a1O35206 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Col15a1O35206 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Col15a1O35206 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC28.59■■■□□ 2.17
Col15a1O35206 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC28.59■■■□□ 2.17
Col15a1O35206 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC28.59■■■□□ 2.17
Col15a1O35206 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC28.59■■■□□ 2.17
Col15a1O35206 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Col15a1O35206 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC28.59■■■□□ 2.17
Col15a1O35206 Gm22238-201ENSMUST00000175222 88 ntBASIC28.59■■■□□ 2.17
Col15a1O35206 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
Col15a1O35206 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Col15a1O35206 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Col15a1O35206 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
Col15a1O35206 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Col15a1O35206 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC28.58■■■□□ 2.17
Col15a1O35206 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC28.58■■■□□ 2.17
Col15a1O35206 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Col15a1O35206 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Col15a1O35206 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC28.57■■■□□ 2.16
Col15a1O35206 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC28.57■■■□□ 2.16
Col15a1O35206 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Col15a1O35206 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC28.56■■■□□ 2.16
Col15a1O35206 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Col15a1O35206 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
Col15a1O35206 Gm40881-201ENSMUST00000223397 166 ntBASIC28.55■■■□□ 2.16
Col15a1O35206 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC28.55■■■□□ 2.16
Col15a1O35206 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC28.54■■■□□ 2.16
Col15a1O35206 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC28.54■■■□□ 2.16
Col15a1O35206 Gm13241-201ENSMUST00000094493 780 ntBASIC28.54■■■□□ 2.16
Col15a1O35206 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC28.54■■■□□ 2.16
Col15a1O35206 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Col15a1O35206 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
Col15a1O35206 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC28.53■■■□□ 2.16
Col15a1O35206 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC28.53■■■□□ 2.16
Col15a1O35206 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Col15a1O35206 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Col15a1O35206 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC28.52■■■□□ 2.16
Col15a1O35206 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC28.51■■■□□ 2.16
Col15a1O35206 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Col15a1O35206 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC28.51■■■□□ 2.15
Col15a1O35206 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC28.5■■■□□ 2.15
Col15a1O35206 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Col15a1O35206 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC28.5■■■□□ 2.15
Col15a1O35206 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Col15a1O35206 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC28.5■■■□□ 2.15
Col15a1O35206 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC28.5■■■□□ 2.15
Col15a1O35206 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Col15a1O35206 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Col15a1O35206 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Col15a1O35206 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC28.49■■■□□ 2.15
Col15a1O35206 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Col15a1O35206 Gm43034-201ENSMUST00000198678 1364 ntBASIC28.49■■■□□ 2.15
Col15a1O35206 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Col15a1O35206 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Col15a1O35206 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Col15a1O35206 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Col15a1O35206 Gm9847-201ENSMUST00000052528 599 ntBASIC28.48■■■□□ 2.15
Col15a1O35206 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Col15a1O35206 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
Col15a1O35206 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC28.46■■■□□ 2.15
Col15a1O35206 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC28.45■■■□□ 2.15
Col15a1O35206 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC28.45■■■□□ 2.14
Col15a1O35206 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Col15a1O35206 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Col15a1O35206 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC28.44■■■□□ 2.14
Col15a1O35206 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Col15a1O35206 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Col15a1O35206 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Col15a1O35206 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC28.43■■■□□ 2.14
Col15a1O35206 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Col15a1O35206 Gm42699-201ENSMUST00000198104 1657 ntBASIC28.42■■■□□ 2.14
Col15a1O35206 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Col15a1O35206 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Col15a1O35206 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Col15a1O35206 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Col15a1O35206 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Col15a1O35206 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Col15a1O35206 Gm11847-201ENSMUST00000125165 1119 ntBASIC28.41■■■□□ 2.14
Col15a1O35206 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC28.41■■■□□ 2.14
Col15a1O35206 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Col15a1O35206 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC28.41■■■□□ 2.14
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms