Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
B020004C17RikJ3QP07 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
B020004C17RikJ3QP07 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC24.91■■□□□ 1.58
B020004C17RikJ3QP07 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
B020004C17RikJ3QP07 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
B020004C17RikJ3QP07 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
B020004C17RikJ3QP07 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
B020004C17RikJ3QP07 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
B020004C17RikJ3QP07 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC24.9■■□□□ 1.58
B020004C17RikJ3QP07 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
B020004C17RikJ3QP07 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC24.9■■□□□ 1.58
B020004C17RikJ3QP07 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC24.9■■□□□ 1.58
B020004C17RikJ3QP07 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
B020004C17RikJ3QP07 Nsd1-206ENSMUST00000224918 1001 ntBASIC24.9■■□□□ 1.58
B020004C17RikJ3QP07 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
B020004C17RikJ3QP07 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
B020004C17RikJ3QP07 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.57
B020004C17RikJ3QP07 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
B020004C17RikJ3QP07 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
B020004C17RikJ3QP07 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
B020004C17RikJ3QP07 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
B020004C17RikJ3QP07 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
B020004C17RikJ3QP07 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC24.87■■□□□ 1.57
B020004C17RikJ3QP07 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC24.87■■□□□ 1.57
B020004C17RikJ3QP07 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
B020004C17RikJ3QP07 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
B020004C17RikJ3QP07 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
B020004C17RikJ3QP07 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
B020004C17RikJ3QP07 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
B020004C17RikJ3QP07 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
B020004C17RikJ3QP07 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC24.86■■□□□ 1.57
B020004C17RikJ3QP07 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC24.86■■□□□ 1.57
B020004C17RikJ3QP07 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
B020004C17RikJ3QP07 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC24.85■■□□□ 1.57
B020004C17RikJ3QP07 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
B020004C17RikJ3QP07 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
B020004C17RikJ3QP07 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC24.85■■□□□ 1.57
B020004C17RikJ3QP07 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
B020004C17RikJ3QP07 Gm21956-201ENSMUST00000179946 522 ntBASIC24.84■■□□□ 1.57
B020004C17RikJ3QP07 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
B020004C17RikJ3QP07 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC24.83■■□□□ 1.57
B020004C17RikJ3QP07 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
B020004C17RikJ3QP07 Gm12922-201ENSMUST00000120626 809 ntBASIC24.83■■□□□ 1.57
B020004C17RikJ3QP07 Gm11847-201ENSMUST00000125165 1119 ntBASIC24.83■■□□□ 1.57
B020004C17RikJ3QP07 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
B020004C17RikJ3QP07 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
B020004C17RikJ3QP07 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC24.83■■□□□ 1.57
B020004C17RikJ3QP07 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC24.83■■□□□ 1.56
B020004C17RikJ3QP07 Gm10399-202ENSMUST00000202768 748 ntBASIC24.82■■□□□ 1.56
B020004C17RikJ3QP07 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC24.82■■□□□ 1.56
B020004C17RikJ3QP07 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
B020004C17RikJ3QP07 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
B020004C17RikJ3QP07 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
B020004C17RikJ3QP07 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
B020004C17RikJ3QP07 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC24.81■■□□□ 1.56
B020004C17RikJ3QP07 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
B020004C17RikJ3QP07 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
B020004C17RikJ3QP07 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
B020004C17RikJ3QP07 AC117245.4-201ENSMUST00000217388 1646 ntBASIC24.8■■□□□ 1.56
B020004C17RikJ3QP07 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
B020004C17RikJ3QP07 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC24.8■■□□□ 1.56
B020004C17RikJ3QP07 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
B020004C17RikJ3QP07 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC24.8■■□□□ 1.56
B020004C17RikJ3QP07 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
B020004C17RikJ3QP07 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
B020004C17RikJ3QP07 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
B020004C17RikJ3QP07 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
B020004C17RikJ3QP07 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
B020004C17RikJ3QP07 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
B020004C17RikJ3QP07 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
B020004C17RikJ3QP07 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
B020004C17RikJ3QP07 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
B020004C17RikJ3QP07 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
B020004C17RikJ3QP07 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC24.75■■□□□ 1.55
B020004C17RikJ3QP07 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
B020004C17RikJ3QP07 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC24.75■■□□□ 1.55
B020004C17RikJ3QP07 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
B020004C17RikJ3QP07 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
B020004C17RikJ3QP07 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
B020004C17RikJ3QP07 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
B020004C17RikJ3QP07 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
B020004C17RikJ3QP07 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
B020004C17RikJ3QP07 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC24.74■■□□□ 1.55
B020004C17RikJ3QP07 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
B020004C17RikJ3QP07 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
B020004C17RikJ3QP07 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
B020004C17RikJ3QP07 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
B020004C17RikJ3QP07 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC24.73■■□□□ 1.55
B020004C17RikJ3QP07 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
B020004C17RikJ3QP07 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
B020004C17RikJ3QP07 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
B020004C17RikJ3QP07 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC24.72■■□□□ 1.55
B020004C17RikJ3QP07 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
B020004C17RikJ3QP07 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
B020004C17RikJ3QP07 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
B020004C17RikJ3QP07 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC24.71■■□□□ 1.55
B020004C17RikJ3QP07 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC24.71■■□□□ 1.55
B020004C17RikJ3QP07 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
B020004C17RikJ3QP07 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC24.71■■□□□ 1.55
B020004C17RikJ3QP07 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms