Protein–RNA interactions for Protein: F6SW83

Gm10477, Predicted gene 10477, mousemouse

Predictions only

Length 55 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10477F6SW83 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm10477F6SW83 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm10477F6SW83 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Gm10477F6SW83 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm10477F6SW83 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm10477F6SW83 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm10477F6SW83 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Gm10477F6SW83 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.24■□□□□ 0.83
Gm10477F6SW83 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm10477F6SW83 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm10477F6SW83 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm10477F6SW83 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Gm10477F6SW83 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm10477F6SW83 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm10477F6SW83 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Gm10477F6SW83 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm10477F6SW83 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Gm10477F6SW83 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Gm10477F6SW83 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.22■□□□□ 0.83
Gm10477F6SW83 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm10477F6SW83 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm10477F6SW83 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm10477F6SW83 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm10477F6SW83 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.21■□□□□ 0.83
Gm10477F6SW83 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm10477F6SW83 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm10477F6SW83 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Gm10477F6SW83 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm10477F6SW83 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm10477F6SW83 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Gm10477F6SW83 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Gm10477F6SW83 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm10477F6SW83 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm10477F6SW83 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm10477F6SW83 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Gm10477F6SW83 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm10477F6SW83 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm10477F6SW83 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Gm10477F6SW83 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
Gm10477F6SW83 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm10477F6SW83 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm10477F6SW83 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm10477F6SW83 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm10477F6SW83 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Gm10477F6SW83 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Gm10477F6SW83 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm10477F6SW83 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm10477F6SW83 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Gm10477F6SW83 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Gm10477F6SW83 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm10477F6SW83 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.17■□□□□ 0.82
Gm10477F6SW83 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm10477F6SW83 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
Gm10477F6SW83 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm10477F6SW83 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm10477F6SW83 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm10477F6SW83 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm10477F6SW83 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm10477F6SW83 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm10477F6SW83 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.16■□□□□ 0.82
Gm10477F6SW83 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.16■□□□□ 0.82
Gm10477F6SW83 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.15■□□□□ 0.82
Gm10477F6SW83 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm10477F6SW83 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Gm10477F6SW83 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm10477F6SW83 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm10477F6SW83 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Gm10477F6SW83 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm10477F6SW83 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Gm10477F6SW83 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm10477F6SW83 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm10477F6SW83 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Gm10477F6SW83 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm10477F6SW83 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Gm10477F6SW83 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm10477F6SW83 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm10477F6SW83 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm10477F6SW83 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.12■□□□□ 0.81
Gm10477F6SW83 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.12■□□□□ 0.81
Gm10477F6SW83 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.12■□□□□ 0.81
Gm10477F6SW83 Gm8109-201ENSMUST00000194076 746 ntBASIC20.12■□□□□ 0.81
Gm10477F6SW83 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Gm10477F6SW83 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm10477F6SW83 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm10477F6SW83 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm10477F6SW83 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm10477F6SW83 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm10477F6SW83 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm10477F6SW83 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm10477F6SW83 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm10477F6SW83 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm10477F6SW83 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm10477F6SW83 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm10477F6SW83 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Gm10477F6SW83 Gm22567-201ENSMUST00000175542 342 ntBASIC20.1■□□□□ 0.81
Gm10477F6SW83 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Gm10477F6SW83 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm10477F6SW83 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm10477F6SW83 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Gm10477F6SW83 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms