Protein–RNA interactions for Protein: E9PVD3

Dchs1, Protocadherin-16, mousemouse

Predictions only

Length 3,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dchs1E9PVD3 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Dchs1E9PVD3 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Dchs1E9PVD3 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Dchs1E9PVD3 Gm7417-201ENSMUST00000192950 473 ntBASIC19.63■□□□□ 0.73
Dchs1E9PVD3 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Dchs1E9PVD3 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Dchs1E9PVD3 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
Dchs1E9PVD3 Gm27454-201ENSMUST00000185090 204 ntBASIC19.63■□□□□ 0.73
Dchs1E9PVD3 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Dchs1E9PVD3 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Dchs1E9PVD3 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Dchs1E9PVD3 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.62■□□□□ 0.73
Dchs1E9PVD3 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Dchs1E9PVD3 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Dchs1E9PVD3 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Dchs1E9PVD3 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Dchs1E9PVD3 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Dchs1E9PVD3 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Dchs1E9PVD3 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Dchs1E9PVD3 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.61■□□□□ 0.73
Dchs1E9PVD3 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.61■□□□□ 0.73
Dchs1E9PVD3 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Dchs1E9PVD3 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Dchs1E9PVD3 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Dchs1E9PVD3 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Dchs1E9PVD3 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Dchs1E9PVD3 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.59■□□□□ 0.73
Dchs1E9PVD3 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Dchs1E9PVD3 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Dchs1E9PVD3 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Dchs1E9PVD3 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Dchs1E9PVD3 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Dchs1E9PVD3 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Dchs1E9PVD3 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.58■□□□□ 0.73
Dchs1E9PVD3 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Dchs1E9PVD3 Fezf2-202ENSMUST00000224023 1917 ntBASIC19.58■□□□□ 0.72
Dchs1E9PVD3 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Dchs1E9PVD3 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.57■□□□□ 0.72
Dchs1E9PVD3 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.57■□□□□ 0.72
Dchs1E9PVD3 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Dchs1E9PVD3 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.57■□□□□ 0.72
Dchs1E9PVD3 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Dchs1E9PVD3 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Dchs1E9PVD3 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.57■□□□□ 0.72
Dchs1E9PVD3 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Dchs1E9PVD3 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Dchs1E9PVD3 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Dchs1E9PVD3 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Dchs1E9PVD3 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Dchs1E9PVD3 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Dchs1E9PVD3 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Dchs1E9PVD3 Gm12821-201ENSMUST00000120022 600 ntBASIC19.55■□□□□ 0.72
Dchs1E9PVD3 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.55■□□□□ 0.72
Dchs1E9PVD3 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Dchs1E9PVD3 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Dchs1E9PVD3 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.54■□□□□ 0.72
Dchs1E9PVD3 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Dchs1E9PVD3 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Dchs1E9PVD3 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.54■□□□□ 0.72
Dchs1E9PVD3 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Dchs1E9PVD3 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Dchs1E9PVD3 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Dchs1E9PVD3 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Dchs1E9PVD3 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.53■□□□□ 0.72
Dchs1E9PVD3 Gm29257-201ENSMUST00000186115 639 ntBASIC19.53■□□□□ 0.72
Dchs1E9PVD3 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.52■□□□□ 0.72
Dchs1E9PVD3 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
Dchs1E9PVD3 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.52■□□□□ 0.71
Dchs1E9PVD3 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.52■□□□□ 0.71
Dchs1E9PVD3 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Dchs1E9PVD3 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Dchs1E9PVD3 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Dchs1E9PVD3 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.51■□□□□ 0.71
Dchs1E9PVD3 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Dchs1E9PVD3 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Dchs1E9PVD3 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Dchs1E9PVD3 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Dchs1E9PVD3 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Dchs1E9PVD3 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Dchs1E9PVD3 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Dchs1E9PVD3 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Dchs1E9PVD3 Gm22238-201ENSMUST00000175222 88 ntBASIC19.5■□□□□ 0.71
Dchs1E9PVD3 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Dchs1E9PVD3 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Dchs1E9PVD3 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Dchs1E9PVD3 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Dchs1E9PVD3 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.49■□□□□ 0.71
Dchs1E9PVD3 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Dchs1E9PVD3 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Dchs1E9PVD3 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Dchs1E9PVD3 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Dchs1E9PVD3 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.49■□□□□ 0.71
Dchs1E9PVD3 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Dchs1E9PVD3 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.49■□□□□ 0.71
Dchs1E9PVD3 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Dchs1E9PVD3 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Dchs1E9PVD3 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Dchs1E9PVD3 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Dchs1E9PVD3 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Dchs1E9PVD3 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms