Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Chd3B1AR17 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Chd3B1AR17 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Chd3B1AR17 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Chd3B1AR17 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Chd3B1AR17 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Chd3B1AR17 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Chd3B1AR17 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.56■■□□□ 1.04
Chd3B1AR17 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Chd3B1AR17 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Chd3B1AR17 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chd3B1AR17 Gm14117-201ENSMUST00000122417 843 ntBASIC21.55■■□□□ 1.04
Chd3B1AR17 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chd3B1AR17 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Chd3B1AR17 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Chd3B1AR17 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.54■■□□□ 1.04
Chd3B1AR17 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Chd3B1AR17 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.54■■□□□ 1.04
Chd3B1AR17 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
Chd3B1AR17 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Chd3B1AR17 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
Chd3B1AR17 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Chd3B1AR17 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Chd3B1AR17 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Chd3B1AR17 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Chd3B1AR17 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Chd3B1AR17 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Chd3B1AR17 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Chd3B1AR17 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Chd3B1AR17 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Chd3B1AR17 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Chd3B1AR17 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Chd3B1AR17 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.52■■□□□ 1.04
Chd3B1AR17 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Chd3B1AR17 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Chd3B1AR17 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Chd3B1AR17 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Chd3B1AR17 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Chd3B1AR17 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Chd3B1AR17 Gm15820-201ENSMUST00000201566 728 ntBASIC21.51■■□□□ 1.03
Chd3B1AR17 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.51■■□□□ 1.03
Chd3B1AR17 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Chd3B1AR17 AC093043.1-201ENSMUST00000226700 898 ntBASIC21.51■■□□□ 1.03
Chd3B1AR17 Gm10232-201ENSMUST00000089221 720 ntBASIC21.51■■□□□ 1.03
Chd3B1AR17 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Chd3B1AR17 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Chd3B1AR17 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Chd3B1AR17 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Chd3B1AR17 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.5■■□□□ 1.03
Chd3B1AR17 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Chd3B1AR17 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Chd3B1AR17 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Chd3B1AR17 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Chd3B1AR17 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.49■■□□□ 1.03
Chd3B1AR17 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Chd3B1AR17 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
Chd3B1AR17 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Chd3B1AR17 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Chd3B1AR17 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
Chd3B1AR17 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Chd3B1AR17 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Chd3B1AR17 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Chd3B1AR17 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Chd3B1AR17 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Chd3B1AR17 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Chd3B1AR17 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Chd3B1AR17 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Chd3B1AR17 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Chd3B1AR17 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Chd3B1AR17 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Chd3B1AR17 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Chd3B1AR17 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Chd3B1AR17 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Chd3B1AR17 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Chd3B1AR17 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Chd3B1AR17 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.44■■□□□ 1.02
Chd3B1AR17 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Chd3B1AR17 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Chd3B1AR17 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.44■■□□□ 1.02
Chd3B1AR17 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Chd3B1AR17 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Chd3B1AR17 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Chd3B1AR17 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.43■■□□□ 1.02
Chd3B1AR17 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Chd3B1AR17 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Chd3B1AR17 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Chd3B1AR17 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Chd3B1AR17 Gm22567-201ENSMUST00000175542 342 ntBASIC21.43■■□□□ 1.02
Chd3B1AR17 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Chd3B1AR17 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Chd3B1AR17 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Chd3B1AR17 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Chd3B1AR17 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Chd3B1AR17 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Chd3B1AR17 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Chd3B1AR17 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Chd3B1AR17 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Chd3B1AR17 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.41■■□□□ 1.02
Chd3B1AR17 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Chd3B1AR17 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms